Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02666 ATGGAGGATACCCAAGAAATTGGGGAGCAAACACATGAAGAAGTGATTTCAGACAAAACATCTGAGAGGCAGGAAACTCTTGATGAAATTCTTTCACGGCACAGGAAAGAGATATCGCAGCTGCAGAAAAAGGAAGTTGAGATGAAAAAGGCTGCAGCTAGAGGTAGCAAGGCTGAGCAGAAATCTAAGAAGAAGCAAGTAGAGGAAGAGGTTTCTCAACTTTCTGCTAAGCTTAAGGAGAAACAAGCCAAAGAATTGGCTGCATTAGGCTATAGCAGTGGTAATGGAAATGAAAAGAGCAATTTGGACACTTTGGTGAAGGCCATAGCTGGTGTGTCTGTTACTAGTCAACCTGAACACACAAAGGTCAGCAAGGCCAAACAGAGGCGAGACAAAAGAGCTCAACAAGAAGCAGAAAGGGAGCAGAGGATCCAAGCAGAGCAGAGTGACATTGTGAGTAATCGAATGATTGAAAATGAGAAATTGGAAAAGAAGTTGAAGCCTCTTGGTTTGACTGTTTGTGAAATAAAGCCTGATGGGCACTGCCTCTATAGAGCTGTTGAGGATCAGCTGGCCCTCCTCTCTGGGGGTAGATCTCCTTATACATACCAAGAACTTCGAGAAATGGTGGCTGCTTACATGAGAAAGAATACATCTGATTTCCTTCCATTTTTTCTGTCAGAGAATTTAATTGAAGATGATGATTCTGATGAATCACTTGCTCAAAAGTTTGAAAATTATTGTAAAGATGTGGAGTCCACAGCTACATGGGGAGGACAACTAGAGCTTGGTGCCTTGACTCACTGCCTGAAGAAGCATATTATGATATTTTCAGGATCCTTCCCAGATGTGGAGATGGGCAAAGAGTATAAATCTGATGGTGGCACTGGCTTGTCTAATTTGAGTATCATGCTTTCTTATCATAAGCATGCTTTTGGCCTAGGAGAGCATTATAATTCTGTGGTCCCAGCATGA 975 0.4236 MEDTQEIGEQTHEEVISDKTSERQETLDEILSRHRKEISQLQKKEVEMKKAAARGSKAEQKSKKKQVEEEVSQLSAKLKEKQAKELAALGYSSGNGNEKSNLDTLVKAIAGVSVTSQPEHTKVSKAKQRRDKRAQQEAEREQRIQAEQSDIVSNRMIENEKLEKKLKPLGLTVCEIKPDGHCLYRAVEDQLALLSGGRSPYTYQELREMVAAYMRKNTSDFLPFFLSENLIEDDDSDESLAQKFENYCKDVESTATWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSDGGTGLSNLSIMLSYHKHAFGLGEHYNSVVPA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02666 324 SUPERFAMILY Cysteine proteinases 136 323 IPR038765 -
Cca03g02666 324 Pfam OTU-like cysteine protease 177 318 IPR003323 -
Cca03g02666 324 MobiDBLite consensus disorder prediction 116 143 - -
Cca03g02666 324 Coils Coil 24 84 - -
Cca03g02666 324 Gene3D - 157 323 - -
Cca03g02666 324 PANTHER DEUBIQUITINASE OTUD6B 25 323 - -
Cca03g02666 324 MobiDBLite consensus disorder prediction 1 26 - -
Cca03g02666 324 MobiDBLite consensus disorder prediction 122 143 - -
Cca03g02666 324 MobiDBLite consensus disorder prediction 8 26 - -
Cca03g02666 324 ProSiteProfiles OTU domain profile. 171 324 IPR003323 -
Cca03g02666 324 MobiDBLite consensus disorder prediction 38 67 - -
Cca03g02666 324 PANTHER OTU DOMAIN CONTAINING PROTEIN 25 323 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02666 K18342 - gmx:100819977 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02666 03 47958290 47962047 Cca03g02666 03 47958290 47962047 ECH