Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02663 ATGGCTGAAGGAGAGGAGCGTATTGAGCTTAAATTCCGCATATTTGATGGAACTGATATAGCACACAGTACTTATTCTTCATCTACGACAGTTGGTACCATTAAGCAAAAGCTAGTTGCTGAGTGGCCTCAAGGTAAAACAGTTATACCAAAGTCAGTAAGTGACTTAAAACTTATACACGCCGGTAAAGTTTTGGAAAACAGCAAAACTCTTGCTGATTCCAGAATAACGTTTAGTGACATCCCTGGTGCTGTTACCATGCATGTTGTAGTACAGCCTCCAGTAACAAAAAAGAAAACAGAGAAGAATCAGGAGGACAAGCAAAAGATGAATTCATGCTCATGCACTATCCTTTAG 357 0.3978 MAEGEERIELKFRIFDGTDIAHSTYSSSTTVGTIKQKLVAEWPQGKTVIPKSVSDLKLIHAGKVLENSKTLADSRITFSDIPGAVTMHVVVQPPVTKKKTEKNQEDKQKMNSCSCTIL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02663 118 CDD Ubl_MUBs_plant 8 94 - -
Cca03g02663 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 118 IPR040015 -
Cca03g02663 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 116 IPR039540 -
Cca03g02663 118 PIRSF MUB 1 118 IPR017000 -
Cca03g02663 118 SUPERFAMILY Ubiquitin-like 4 97 IPR029071 -
Cca03g02663 118 Gene3D - 1 100 - -
Cca03g02663 118 ProSiteProfiles Ubiquitin domain profile. 8 76 IPR000626 GO:0005515
Cca03g02663 118 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02663 Cca-Chr3 47942096 47945807 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02663 - - gmx:100818909 199.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02663 03 47942096 47945807 Cca03g02663 03 47942096 47945807 ECH