Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02651 ATGTGGGAGAGAGAGAGAAAAGCGAGGATGAGGGAATCAGCGGTGATAATAGTGGGAGGTGGAACATCGGGCATAGCCACCGCAGCATGCTTAACGAAGCAATCAATACCTTACATACTCCTCGAGAGAGAAGATTGTTTCGCTTCTCTGTGGCAGAAGTACACCTACGATAGGCTGCACCTCCACTTGAGGAAGCAAGTGTGCCAGCTACCGCACCTTCCCTTTCCCACCACTTACCCTCACTACGTGCCTCGGAAGCACTTCATCGACTACTTGGGAAACTACGTCCACCACTTCGATATCAACCCTCTCTACCAGCGCTCGGTGGAGCTCGCGGAGTACCACAGCAGGGGGAGATGGAGGGTCAGGGCCAAGAACCGATGCTCCGGCGAGATGGAGGAGTACGCCGCGAGGTTCTTGGTGGTGGCCAGCGGCGAAACGGCGGAGCCCAATGTGCCGCCGGTTGAAGGCTTGGCGAGTTTCAATGGGAAAGTGATTCATTCGACGGGGTACAAGAACGGGAAGGAGTTTAGGGATCAACATGTTCTCGTTGTTGGATCTGGAAATTCTGGAATGGAGATTGCACTAGATTTGGCCAATTTTGGTGCCAAACCTTCCATCATTGTTCGCAGCCCGGTTCATTTTCTGTCGAGGGATATGATGTATTATGCGTCGCTTATGCTCAAGTATCTGTCGCTAAGTACGGTGGAGAAACTGTTGGTGTTTGTTAGCAGGATTGTGTATGGGGATCTGAGTGACTATGGGATACCTTTTCCCACGGAAGGGCCTTTTACTATGAAGATGAAGTATGGTAAGTTCCCCATCATTGATTTGGGAACTGTCAAGAAAATCAAATCTGGTGAGATACAGGTACGCCCAAGGACATAG 888 0.5079 MWERERKARMRESAVIIVGGGTSGIATAACLTKQSIPYILLEREDCFASLWQKYTYDRLHLHLRKQVCQLPHLPFPTTYPHYVPRKHFIDYLGNYVHHFDINPLYQRSVELAEYHSRGRWRVRAKNRCSGEMEEYAARFLVVASGETAEPNVPPVEGLASFNGKVIHSTGYKNGKEFRDQHVLVVGSGNSGMEIALDLANFGAKPSIIVRSPVHFLSRDMMYYASLMLKYLSLSTVEKLLVFVSRIVYGDLSDYGIPFPTEGPFTMKMKYGKFPIIDLGTVKKIKSGEIQVRPRT 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02651 295 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 12 293 - -
Cca03g02651 295 Gene3D - 3 239 IPR036188 -
Cca03g02651 295 PRINTS FAD-dependent pyridine nucleotide reductase signature 181 199 - -
Cca03g02651 295 PRINTS FAD-dependent pyridine nucleotide reductase signature 15 34 - -
Cca03g02651 295 SUPERFAMILY FAD/NAD(P)-binding domain 15 275 IPR036188 -
Cca03g02651 295 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Cca03g02651 295 PRINTS Pyridine nucleotide disulphide reductase class-II signature 177 201 - -
Cca03g02651 295 PRINTS Pyridine nucleotide disulphide reductase class-II signature 14 36 - -
Cca03g02651 295 Pfam Pyridine nucleotide-disulphide oxidoreductase 16 212 - -
Cca03g02651 295 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 12 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02651 Cca-Chr3 47868487 47870911 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02651 K11816 - gmx:100777958 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02651 03 47868487 47870911 Cca03g02651 03 47868487 47870911 ECH