Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02636 ATGGCTCGTCTTGCCACCTTATCGGAGGAACCGGTGAGCGAACAAGACAAGAAAAGAAGCTCCTCCAACAAATGGCGCAAGTGGAAGTGGATATCACTGTTCCAGAAGAAGCAGGACCTCAAGATCCTCCTCAGCGTCCTCGCTTGCCctctcttccccgtccctctccctctccctccccactccattcctccccacctctcctcctccgctcACTACATCATCCAACACTTCACCGCCGCCACCTCTTCCCGCAACTTCCACGCCACCGTCAAGAACGTCTTCGCCACCGGCAACCTCCAAATGTCCGCCGTCGATCATCTCGGACTCTCCCACTCTGGCTGCTTTGTCATCTGGCAAATGTTCCCTCACAAGTGGCTGTTTGACTTGGTTGCCGCCTCTCACAAGGTTCTCGCCGGTAGCGATGGCACCGTCGCTTGGCGCCATACCCCTTGGCTCCGTGCACACGCCGCCAAAGGCGCCGTTCGCCCTCTTCGACGCGCTCTTCAGGCAACTTCATCTCTTCTTTTTATATTTTCTATTTACTGTTACTCGCCTCATAAATTAACTCTTACTTTCACTAGCGGACTGGACCCTTTGGCAGTTTCTGCTGTATTCTGTGCTGCGCAATACATGGGAGAAAAGCAAATCTCAGGCATGGATTGTTTCGTTTTAAAGGTGTCAGCAGATCAGAAGGACCTGGTGGAGCGCAGTGATAGCACTGCTGAGATGATCAAGCACGTTGCATTTGGCTACTTCAGCCAAAAAAATGGGCTTCTAGTGCACCTTGAGGACTCTTACCTCACCCGGATTCAATCACCTGGGACACACCCCACGTATTGGGAGACCTCGATGTCAACCAAAATTGAGGATTACCGAATGGTGGATGGTGTCATGATTGCACATGCTGGCCATTCAACTGTGATCATCACAAGGTTTGGAGACAATCAAAAGACGGGCCCTGCCATCACACGGTTGGAAGAATCCTGGACCATTGATGACGTTGCATTCAATGTCCCTGGCTTATCCATGGACTGCTTCATACCCCCCAAGGAACTCAACAAACACTATCCACATGAAGATCTAGATTGGAGATCACCCTTGCATGAAGCATGA 1116 0.4785 MARLATLSEEPVSEQDKKRSSSNKWRKWKWISLFQKKQDLKILLSVLACPLFPVPLPLPPHSIPPHLSSSAHYIIQHFTAATSSRNFHATVKNVFATGNLQMSAVDHLGLSHSGCFVIWQMFPHKWLFDLVAASHKVLAGSDGTVAWRHTPWLRAHAAKGAVRPLRRALQATSSLLFIFSIYCYSPHKLTLTFTSGLDPLAVSAVFCAAQYMGEKQISGMDCFVLKVSADQKDLVERSDSTAEMIKHVAFGYFSQKNGLLVHLEDSYLTRIQSPGTHPTYWETSMSTKIEDYRMVDGVMIAHAGHSTVIITRFGDNQKTGPAITRLEESWTIDDVAFNVPGLSMDCFIPPKELNKHYPHEDLDWRSPLHEA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02636 371 PANTHER LIPASE 1 359 IPR006873 -
Cca03g02636 371 PANTHER GB|AAD30234.1 1 359 - -
Cca03g02636 371 Pfam Protein of unknown function (DUF620) 193 350 IPR006873 -
Cca03g02636 371 Pfam Protein of unknown function (DUF620) 102 171 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02636 Cca-Chr3 47731099 47733814 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02636 - - gmx:100800778 522.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02636 03 47731099 47733814 Cca03g02636 03 47731099 47733814 ECH
Cca03g02636 03 47731099 47733814 Cca02g00710 02 16658295 16661661 PCT