Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02622 ATGGGGCGGGACGCCAAAAACGACGTCGCATCAACTCTGTTGGAGCCTTTGACTTCCATAAGAGCTTCGAGGCTTCAAACGTTGGGAAACATCATCGTCACGGTGGTCGGAACTGGGGTTTTGGGATTGCCCTTCGCTTTTCGGATCGCTGGATGGCTCGCAGGATCGCTTGGGGTTGCCATCGTTGGCTTATCCACCTACTATTGCATGCTCTTGCTTGTTTTGTGTCGAGAAAAATTGTCATCAGAAGAACCATTAGTGGAAGCGAGCACATATGGAGACTTGGGTTATAGGTCCTTTGGAACCCCGGGTCGGTATGTGACAGAAGTTATAATTTTGGTAGCACAATGTGCAGGGTCTGTTGCTTATTTTGTATTTATTGGACAAAACCTTTATTCTGTATTCCAAGACCAAGGACTGTCAATGGCCTCCTACATATTTATGTTGGTACCGCTTGAGACTGGATTGTCTTGGATAGGGAGTTTATCTGCTTTGGCTCCTTTTAGCATTTTTGCTGATGTGTGCAATGTCTTAGCTATGGGCATTGTGGTGAAGGAGGATATTCAAAAGGCCGTAGGGGAGGGATTTTCATTTAGACAAAGGACAGCAATCACATCCAACATTGGGGGGTTGCCTTTTGCAGCAGGCATGGCAGTTTTTTGTTTTGAGGGGTTTGGTATGACTCTGGCCCTGGAGAATTCTATGCAGGAAAGGCGTAAATTCCCAAGATTGCTGGCTCAGACTTTTGGTGGGATAACACTTGTGTACATTCTTTTTGGGTTTTGTGGTTACATGGCTTATGGTGAAGAAACTAGAGACATTGTCACCCTCAATCTCCCTAGGAATTGGTCATCTCTTGCAGTGCAGGTAGTAAAGACATCCATATTTAAGCTCTTTGGTTACTCTTAA 909 0.4521 MGRDAKNDVASTLLEPLTSIRASRLQTLGNIIVTVVGTGVLGLPFAFRIAGWLAGSLGVAIVGLSTYYCMLLLVLCREKLSSEEPLVEASTYGDLGYRSFGTPGRYVTEVIILVAQCAGSVAYFVFIGQNLYSVFQDQGLSMASYIFMLVPLETGLSWIGSLSALAPFSIFADVCNVLAMGIVVKEDIQKAVGEGFSFRQRTAITSNIGGLPFAAGMAVFCFEGFGMTLALENSMQERRKFPRLLAQTFGGITLVYILFGFCGYMAYGEETRDIVTLNLPRNWSSLAVQVVKTSIFKLFGYS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02622 302 Pfam Transmembrane amino acid transporter protein 22 291 IPR013057 -
Cca03g02622 302 PANTHER BNAA05G27230D PROTEIN 16 290 - -
Cca03g02622 302 PANTHER AMINO ACID TRANSPORTER 16 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02622 Cca-Chr3 47613362 47615942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02622 21 290 Organic Solute Cotransporters AT3G11900 69.259 1.64e-136 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02622 K14209 - gmx:100305659 501.901