Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02621 ATGGTGAAAACAAAGCAGAGGCGCACAGGAAAAGTTCCTGTTAAAAAAAGTGGTACTTCTTCACAATGCCTCACTGATTCTCTAAACTGTGATGATCCGATTGAGGATAGTGATTGGATTATAGTGAAAAAGCAGAGAGTCACCATTCTGGTGCCTGCTGCGCCTCTCAATGAAAGATCACTAACAGCAAACCAAGGACCAAATCACATGCATCTTATGTCCCCTGAAATAGCAAGTAACCATGTGCAGCTTCCCAAGGAGACATCTACTATACATCCTTCAGGCAATGGACATGAAAAGACCACTTTGTTAGCTGTCCAAAAGGAGACTCGTGCTGAAAGAAGAGCTCCTCCTGCCTTACCTAAACCCACTGTACTCAATCCCCCATCTTTAGATCAAAGAATAGAATCAGAAAATCAACATCAGGTGAATATTTTGAAGCCACACAATGTAGGAATTTGTGATACATCAAAAGTTATTAAGCAGCCCAGAACACTACTTGCACATAGAATGCCCTCCAACCTAGAAACCTTGAATAAAAATTTGAGAGCTTCAAATCTTCAGAGAAAGCTTGAAAGAGCCGGTGGACTGAGCAAGTGGCTGACATCACTCGGACTGGAGCAGTTTGTGAGTATTTTTCATGGGAAAAGTATCAGTAAGTATCAGCTGGTAAATCTAACCATGAAAAAGCTCAAGGATATGGGTGCCAGTGCAGTGGGACCTCGCAGGAAACTGATCCATGCCATGGACTGTGTTTGTCAGCCATATTGCTTTGAGGCGTTGTAG 786 0.4275 MVKTKQRRTGKVPVKKSGTSSQCLTDSLNCDDPIEDSDWIIVKKQRVTILVPAAPLNERSLTANQGPNHMHLMSPEIASNHVQLPKETSTIHPSGNGHEKTTLLAVQKETRAERRAPPALPKPTVLNPPSLDQRIESENQHQVNILKPHNVGICDTSKVIKQPRTLLAHRMPSNLETLNKNLRASNLQRKLERAGGLSKWLTSLGLEQFVSIFHGKSISKYQLVNLTMKKLKDMGASAVGPRRKLIHAMDCVCQPYCFEAL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02621 261 PANTHER F26K24.15 PROTEIN-RELATED 1 260 - -
Cca03g02621 261 Gene3D - 186 254 IPR013761 -
Cca03g02621 261 ProSiteProfiles SAM domain profile. 197 255 IPR001660 GO:0005515
Cca03g02621 261 PANTHER SCP160 1 260 - -
Cca03g02621 261 Pfam SAM domain (Sterile alpha motif) 197 251 IPR001660 GO:0005515
Cca03g02621 261 MobiDBLite consensus disorder prediction 1 23 - -
Cca03g02621 261 SUPERFAMILY SAM/Pointed domain 195 254 IPR013761 -
Cca03g02621 261 SMART SAM_4 189 255 IPR001660 GO:0005515
Cca03g02621 261 CDD SAM_superfamily 197 248 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02621 - - gmx:100804141 432.95