Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02601 AATAGACGCCGAACAGATGTCAGGGACTGGAAACCAAACAAGTTATACGAGCTTCTGGCCACTCTGCCTATCGTTCTCTCCACTCTTACTAAAATATTTGGGTCTCTTTGGTTTGGATGCATTCCGCACGAGAATCTCAAGTTTGTTTCTCTTCCCCTGCCGAACGCACTGCAGAGAAAAAATGGAGTCTGATGCTCTGACATGGGGAGACAAACTCATACTGAGGGGATTGTCATTCCATGGTTTTCATGGAGTGAGGCCCGAAGAAAGGAATCTGGGCCAGAAGTTCTTGGTAGATATAGATGCTTGGCTGGATCTGAAAGAAGCTGGCAAATCTGATCACTTAACACATACAGTTAGTTACACGGATATATATGATATAGCTAAGGAAGTCCTTGAAGGGTCACCTTACAACCTTCTGGAGTCAGTGGTCCAAAAAATTGCAATCACTACTCTGTCAAAGCATAAAGAAATTTCTGCTGTTCGAGTGAAGGTTGGAAAGCCTCATGTTGCAGTTTGGGGTCCAGTTGATTACTTAGGCGTTGAGATACTTAGACGCAGAAGCGATTTGTCAGAGTAG 580 0.4414 IDAEQMSGTGNQTSYTSFWPLCLSFSPLLLKYLGLFGLDAFRTRISSLFLFPCRTHCREKMESDALTWGDKLILRGLSFHGFHGVRPEERNLGQKFLVDIDAWLDLKEAGKSDHLTHTVSYTDIYDIAKEVLEGSPYNLLESVVQKIAITTLSKHKEISAVRVKVGKPHVAVWGPVDYLGVEILRRRSDLSE 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02601 192 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 70 187 - -
Cca03g02601 192 CDD DHNA_DHNTPE 70 186 IPR006157 GO:0004150|GO:0006760
Cca03g02601 192 Pfam Dihydroneopterin aldolase 73 183 IPR006157 GO:0004150|GO:0006760
Cca03g02601 192 PANTHER 7,8-DIHYDRONEOPTERIN ALDOLASE 65 188 - -
Cca03g02601 192 Gene3D - 69 191 IPR043133 -
Cca03g02601 192 SMART FolB_2 72 185 IPR006157 GO:0004150|GO:0006760
Cca03g02601 192 PANTHER DIHYDRONEOPTERIN ALDOLASE 1-RELATED 65 188 IPR006156 GO:0004150|GO:0006760
Cca03g02601 192 TIGRFAM folB_dom: FolB domain 70 187 IPR006157 GO:0004150|GO:0006760
Cca03g02601 192 TIGRFAM folB: dihydroneopterin aldolase 70 184 IPR006156 GO:0004150|GO:0006760
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02601 Cca-Chr3 47417279 47420316 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02601 K01633 - gmx:100527653 230.72