Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02587 ATGGAAATGGAGCCTATTGATAAAGAAGAAAATATTGCTTGTGTGATTGGTGATAGATCAAGTAGTGACGTTGTTGTGAGGTTACGGACTCAGGAAGGTCGAGATGACTGGCTATATTGTCATTCTGAGATTCTTGTAAAGAACTGCAAGTATTTTGCTGACAGGTTATCTGAGAACTGGCCAACTTGTCAGATTCTTGATTCGCGCAACTGTGTTGATGTCTATTGTCAGGAATCGAATTTCGATTACCATGTAAATCTTATTCGCCTTCTATACATTGTCATAGATGATTCAGTTGATGATTTGTGGCATGGTGTTAGAAATGCCTTAGGCATTCTCCAGGTTGCGGTTGAGCTTGGATGCCCACAGATTATTACTGCTTGTGTGAACTACTTAGAAGCGGTCACATGGGAAGAGGCTGAGGAGGAAGAGATATTGAAAATTGTACCTCGAATGGGATTACCAGCCGAGCCTATCCTAGCTAGACTTCAACCAGTTAACCAGTCTGCTATCATAAACATCTTTGTCTCTGCCATCCGCTTTGCTACATCATCTCCACCCCAACAAATGAATGATCTTAAATCATCGGCACAAGAGCAACTTGAGTACATGCTAACTGAAGATGATGATGCCCCTTTATTGACAGCTGATGACAACATAAAACATGAGGTAAAAGAATGTGTAAACAGACTATTTTCACGGTTTAACGACTCATTAATAGCTTTATACTGTGGTTCCACCACTGAATCACTCTTTGAGGCtggaaatattatgttgtttcaatcctatttggctgatttgtcaTGGGTTTGTCAAATACTAACTAAGTTGGAAATAATGAGAGAATTTGTTGAATATTGGTTTGATGCATCAGAAAAGATTGTCAAGGTTCTTGAACAAGGAAATTCTACAACTGAAGTCCTTGAGATAAAGTTACGGGCTATTGAGGTGACATCAAAGGTTTTAGAGGCAATTGGGTATGGTACTGTTGTATTGCCAACTGCAAAACGCCTTAAGGTTTTGAAAGTGTGGCTTCCATTTGTGAGGGTTACAAAACCATTGATTGATTCTGTCACAATGGATTGTGTAAATGCCATGCTGCTTAAAATAGATGGCGAATTGTGGCAATCCTTAGAATCCACTTTTGTCTCTATCATTCTTGCATTGCCATCGGGAGATCAGGCAGATGTTTTAACTGAGTGGCTGGATAACGAGTATATGCAGTATCCAGACTTAACTGAGGCATTTGAAGTATGGTGTTATAGGTCCAAAGTTGCCAAGAGGAGACTATCATTGCCTGGGGatgaacatgtcatgacgatgaacatgtcatga 1335 0.3805 MEMEPIDKEENIACVIGDRSSSDVVVRLRTQEGRDDWLYCHSEILVKNCKYFADRLSENWPTCQILDSRNCVDVYCQESNFDYHVNLIRLLYIVIDDSVDDLWHGVRNALGILQVAVELGCPQIITACVNYLEAVTWEEAEEEEILKIVPRMGLPAEPILARLQPVNQSAIINIFVSAIRFATSSPPQQMNDLKSSAQEQLEYMLTEDDDAPLLTADDNIKHEVKECVNRLFSRFNDSLIALYCGSTTESLFEAGNIMLFQSYLADLSWVCQILTKLEIMREFVEYWFDASEKIVKVLEQGNSTTEVLEIKLRAIEVTSKVLEAIGYGTVVLPTAKRLKVLKVWLPFVRVTKPLIDSVTMDCVNAMLLKIDGELWQSLESTFVSIILALPSGDQADVLTEWLDNEYMQYPDLTEAFEVWCYRSKVAKRRLSLPGDEHVMTMNMS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02587 444 SUPERFAMILY POZ domain 21 132 IPR011333 -
Cca03g02587 444 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 6 439 IPR038920 -
Cca03g02587 444 Gene3D Potassium Channel Kv1.1; Chain A 9 152 IPR011333 -
Cca03g02587 444 PANTHER OS07G0668800 PROTEIN 6 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02587 Cca-Chr3 47226973 47229570 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02587 - - ccaj:109807249 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02587 03 47226973 47229570 Cca03g02587 03 47226973 47229570 ECH