Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02584 ATGGCGACACAGCCTCCGACCTCTTCGAACGCCTTCTCGTTCCTCTCAAAGGGCTGGCGCGAGGTGCGTGACTCGGCGGACGCGGATCTCCGCCTCATGCGGGACAGGGCGAACTCGTTCAAGGACCTAGCGACGTCGTTTGACCGCGAGCTCGAGAACTTCTTCAATTCAGCGGCGCCGCCGTTCGCGGTGCCTGCCATGCGCTCTCCGCCGCCGAGGGAGATCGAATTCGTGAAGAGTCTGCGGCCGAAGTTGTCGGAGATTCGGAGAGCGTACTCGTCCCCCGATTTCAGCAAGAAGGTTCTGGAGAAATGGCGCCCTAGGACGCGAATTCGAATCGACCTTTCCGCTATAAAGAACGCTATCGTGTCAGAGGAGGATGAGGGAATTGTGGATTTCGGGAAGAGGGGGAAGAGGTTGAGTTTCTGGGAAGAGTGGAAAGGCGAGGGCGAGGGCGAATCAAGGGATTGGGAACCGATTCGAGCCTTGAAGGCACGGCTCAAGGAGTTTGAGAAGCGTGGTTCGTCTTTTGATGCTTTCAAGAACAGTGAATTTCTGGAGAAAGTCAAGTCTAGTTTGAAATCAATGTGCAAGGAACCTGAGGAGTCAAAGGATGTGCCACCATTGGATGTACCTGAACTTTTGGCCTACTTTGTAAAACAGTCCGGGCCATTTTTGGACCAACTTGGAGTGAAAAGAGACATATGTGACAAGATAGTAGAAACCTTGTATAGCAAACGCAAAAACCATCTTCTACTGCATTCCCTCTCTGGGGAAGAATCTTCTGTTCTtgggaatggaaatgtaaatgatgaattggatatgcgaaTAGCAAGTGTCCTTCAGAGCACAGGGCACCGGTATGATGGCGGATTCTGGACAGACCATGGAAAGCACGATCCATCAGACAATGAAAGACATGTTGCAATAGTCACAACAGCTAGTCTTCCTTGGATGACTGGAACAGCAGTAAACCCACTATTTCGAGCTGCATATTTATCACAATCTGCAAACCAGAAAGTCACTCTGCTGGTTCCATGGCTTTGTAAATCAGATCAAGAACTAGTTTATCCCAGCAATGTCACTTTTACTTCACCAGAAGAACAGGAACTTTATATACGTAACTGGCTTGAGGATAGGATTGGTTTTAAGGCAGATTTCAAAATTTCTTTTTATCCTGGGAAGTTTTCGAAAGCAAGACGGAGTATAATACCTGCTGGAGATACTTCTCAATTTATACCATCCAGGGATGCTGACATTGCTATTCTGGAAGAACCAGAACATTTGAATTGGTATCATCATGGCAAGCGTTGGACAGACAAATTCAATCATGTTGTTGGTATTGTCCACACAAATTACTTGGAATACATCAAGAGGGAGAAAAATGGGGCACTCCAGGCATTCTTTGTGAAACACATAAACAACTGGGTTACAAGAGCATACTGCCATAAGGTTCTTCGTCTATCGGCTGCTACTCAGGATTTACCCAAGTCTGTGATTTGCAATGTTCATGGTGTGAATCCCAAGTTCTTAAAAATTGGAGAAAAGATTGCTGCAGAGAGGGAGCTTGGGCAGAAAGCCTTTACAAAAGGGGCATATTTCTTGGGAAAGATGGTATGGGCAAAGGGATATAAGGAGTTGATAGATTTATTGGCAAAGCATAAGGGCGACCTTGATGGCTTCAAGTTGGATGTATTTGGAAATGGAGAGGATGCTAATGAAGTTCAGAGTGCAGCTAGAAGGTTGGATTTGAATCTCAACTTTCAGAAAGGAAGAGATCATGCGGACGATTCTCTTCATGGGTAG 1806 0.4568 MATQPPTSSNAFSFLSKGWREVRDSADADLRLMRDRANSFKDLATSFDRELENFFNSAAPPFAVPAMRSPPPREIEFVKSLRPKLSEIRRAYSSPDFSKKVLEKWRPRTRIRIDLSAIKNAIVSEEDEGIVDFGKRGKRLSFWEEWKGEGEGESRDWEPIRALKARLKEFEKRGSSFDAFKNSEFLEKVKSSLKSMCKEPEESKDVPPLDVPELLAYFVKQSGPFLDQLGVKRDICDKIVETLYSKRKNHLLLHSLSGEESSVLGNGNVNDELDMRIASVLQSTGHRYDGGFWTDHGKHDPSDNERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSANQKVTLLVPWLCKSDQELVYPSNVTFTSPEEQELYIRNWLEDRIGFKADFKISFYPGKFSKARRSIIPAGDTSQFIPSRDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFFVKHINNWVTRAYCHKVLRLSAATQDLPKSVICNVHGVNPKFLKIGEKIAAERELGQKAFTKGAYFLGKMVWAKGYKELIDLLAKHKGDLDGFKLDVFGNGEDANEVQSAARRLDLNLNFQKGRDHADDSLHG 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02584 601 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 7 601 - -
Cca03g02584 601 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 7 601 IPR044525 GO:0046481
Cca03g02584 601 Gene3D Glycogen Phosphorylase B; 506 585 - -
Cca03g02584 601 Gene3D Glycogen Phosphorylase B; 435 505 - -
Cca03g02584 601 CDD Glycosyltransferase_GTB-type 437 587 - -
Cca03g02584 601 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 308 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02584 Cca-Chr3 47151301 47158649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02584 10 600 Glycosyltransferase AT3G11670 69.458 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02584 K09480 - gmx:100796354 1120.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02584 03 47151301 47158649 Cca03g02584 03 47151301 47158649 ECH