Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02578 ATGGACCCAGCCTATGTTGGAAGAGGACCCGGAAAAGACTCATTCTCCCAGCAGCCCTCTTCACATGGGTATGGAGAGGCGCCAGCACCACCACCAATGGCGGCACCGCCACAAATGATGTATTACCCTCCACCAATGGGCTACAACCCAGGCCCAGCAGCACACATGCCTCACCAAGGATACCCTCCAGGCTACACCCCATATCCAAACGAGTACGCTCAGGCCAACGTGTACCATTACCCCGCAGGCCCATACTTTCGCAACCCTCCACCCGCCTATCATAGGAGTGGTGGAGGAAAAGCCTTCATCCGCGGCTTCATAATGTGTTTGTGTATCTTATTCACCGCTTTCTTCGTTGCAACCCTTGTTATGGCGCTAGCCCTTCACCCCCAACTCCCTCTCTACACCGTTAATTCCCTCTCCGTCCTGAATTTCAACACCACTTCCACATTAGCCGGTGATTGGAACGCCAGCTTTATGATCCAGAACATCAACGATAAGCTAACGGGTGAGTTTTCCGGATTTAAGGCGGATTTGTTGCACAAGAACGACGTCGTAGCGGTGAGTTTTGTACCCGATTTTGTGTTGGACAAGAAACAGGTTAAACACGTGGATGTGAAGCCCTCCTCGACAGGAACGTCGTTCCCGGAGTGGAACTTGGGTGATTTGGGGAAGGAACAAGCCACTGGCTCTATCACTTTCACGATGAGGATATCTTCCATGGTCGCCTTCAAGTCTAGCTCAATGTCCACCAGAGGATCGTTGGTGCTGGCCCTTTGTGACGGTTTGAAGGTTGTGTTTCAGAATAACACCGGCACCGGCGCCTTGGAAAATGGGGGAAGCCCCATCCTTTGCCAACTTTATATGTGA 870 0.5195 MDPAYVGRGPGKDSFSQQPSSHGYGEAPAPPPMAAPPQMMYYPPPMGYNPGPAAHMPHQGYPPGYTPYPNEYAQANVYHYPAGPYFRNPPPAYHRSGGGKAFIRGFIMCLCILFTAFFVATLVMALALHPQLPLYTVNSLSVLNFNTTSTLAGDWNASFMIQNINDKLTGEFSGFKADLLHKNDVVAVSFVPDFVLDKKQVKHVDVKPSSTGTSFPEWNLGDLGKEQATGSITFTMRISSMVAFKSSSMSTRGSLVLALCDGLKVVFQNNTGTGALENGGSPILCQLYM 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02578 289 MobiDBLite consensus disorder prediction 1 31 - -
Cca03g02578 289 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 48 286 - -
Cca03g02578 289 PANTHER PROTEIN, PUTATIVE-RELATED 48 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02578 Cca-Chr3 47098986 47100305 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02578 - - gmx:100808758 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02578 03 47098986 47100305 Cca02g00635 02 14343887 14345356 PCT