Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02569 ATGCGACTCAGCTCTCCGGTGTTATTGTTATTTGCTGATGAATCTTTCTGGTCGATTGGCTTTGGCTCACCGGATTTTGAAGCAGAGGCTGTTTTCGATCAGGAGTTTATCAAGGTCAAACTATCCGAATATATTGGGAAAAAATATGTTGTCCTCTTTTTCTACCCTTTGGACTTCACATTTGTTTGTCCGACAGAAATCATTGCTTTCAGCGACCGGCATGCAGAGTTTGAGGAACTAGATGCAGAGATATTGGGTGTTTCAGTTGACAGTGTGTTTTCGCATCTTGCATGGGTTCAAACTGATAGAAAGTCAGGTGGTCTTGGCGACTTGAAGTATCCTTTGATTTCTAATATCACCAAATCCATCTCGAAATCTTATGGTGTTCTTATTCCTGATCAGGGGATTGCGTTGAGAGGATTGTTTATTATTGACAAGGATGGGGTTATTCAGCATTCTACCATTAACAACCTGGCAATTGGTAGAAGTGTTGATGAGACAAAGAGAACACTCCAGGCCTTGCAGTACGTGCAGGAGAACCCAGATGAAGTTTGCCCTGCTGGATGGAAGCCTGGTGAGAAGTCTATGAAGCCGGACCCTAAACTTAGCAAGGAGTACTTTGCTGCGGTGTAG 633 0.4344 MRLSSPVLLLFADESFWSIGFGSPDFEAEAVFDQEFIKVKLSEYIGKKYVVLFFYPLDFTFVCPTEIIAFSDRHAEFEELDAEILGVSVDSVFSHLAWVQTDRKSGGLGDLKYPLISNITKSISKSYGVLIPDQGIALRGLFIIDKDGVIQHSTINNLAIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFAAV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02569 210 PIRSF AHPC 12 209 IPR024706 -
Cca03g02569 210 PANTHER 1-CYS PEROXIREDOXIN PER1 19 210 - -
Cca03g02569 210 ProSiteProfiles Thioredoxin domain profile. 17 176 IPR013766 -
Cca03g02569 210 SUPERFAMILY Thioredoxin-like 23 208 IPR036249 -
Cca03g02569 210 CDD PRX_Typ2cys 24 192 - -
Cca03g02569 210 Pfam AhpC/TSA family 23 152 IPR000866 GO:0016209|GO:0016491
Cca03g02569 210 Pfam C-terminal domain of 1-Cys peroxiredoxin 173 207 IPR019479 GO:0051920
Cca03g02569 210 Gene3D Glutaredoxin 15 210 - -
Cca03g02569 210 PANTHER THIOREDOXIN PEROXIDASE 19 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02569 Cca-Chr3 47011137 47012952 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02569 K03386 - jre:109013543 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02569 03 47011137 47012952 Cca03g02569 03 47011137 47012952 ECH