Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02561 ATGAGCCGTAGAAACGGAAGTGGTCCAAAGCTTGACTTGAAGCTGAACCTGTCCCCACCGAGGGTTGAACGGAGACTGGAGTCCCCCACACGCTCGGCGACAGTGTCGCCGACATCACCGCCGAGCTCATGCGTATCCTCTGAGCTGAACCCAGAGGATAAGAGTTACTCTAACAGCCCTGAAGCCACTTCCATGGTGCTTGTGGGTTGCCCTCGCTGCCTCATGTACGTCATGCTGTCCGAGGATGATCCCAAGTGCCCCAAATGCAAAAGCACTGTTTTGCTCGACTTCCTCCATGACGCCAAAAACCCCACCATAAGGAGTTAG 327 0.5505 MSRRNGSGPKLDLKLNLSPPRVERRLESPTRSATVSPTSPPSSCVSSELNPEDKSYSNSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHDAKNPTIRS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02561 108 MobiDBLite consensus disorder prediction 29 61 - -
Cca03g02561 108 PANTHER PUTATIVE-RELATED 1 103 - -
Cca03g02561 108 PANTHER - 1 103 - -
Cca03g02561 108 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02561 Cca-Chr3 46909553 46910827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02561 - - gmx:100805043 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02561 03 46909553 46910827 Cca03g02561 03 46909553 46910827 ECH
Cca02g00605 02 13448993 13449352 Cca03g02561 03 46909553 46910827 PCT