Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02555 ATGGACATGATTCCTGGGAAGATCCGAAAACGAGGctgctcctcctctgcctcctcctcctcctccgtgctccACAACTACCGCTTCAAGAGAACCATCCTCGTCGGGAAGCGTGCCGGATCCACTACGCCCGTCCCCACCTGGAAGCTCATGACCTCCAGATCTCCGCTCCGGCCACTTCCCTCCCCCAAGCCCCGCCAGGTCGCCGTCTCCGCCAGAAAGCTCGCCGCCACTCTATGGGAGATGAACGAGATTCCCTCGCCCGCCCTCAGCTCCAAGAAGGGCCTCAGACCCAGAGACCGAGTCGCCAGGTCCACGCGCTCCGGTTCTCTGCCTCCTCATTTGTCCGATCCATCACACAGTCCCGTCTCCGAGAGAATCGATCGATCCGGAACAGGGAGAAGCCAGAAAAGAACTCCCTCTATTTCTCACAGGCAGAGGGTCACTGAACACCATCTTGGTCCTTTCGATTCTCTTAGCAATGTTAGTCTCATGGAGATTGAAACCAGATCACGAGCGCAGACCCCTGCTTCATCTGCTGTTGGAGTTAAACCACGTTTAAAAGATGTCAATCAGCTTATCCAGGAACAGCGCTCAGATCAGAATGAGATAAATTATTTGATGAAGTGTTTTGCTGAAGAAAAGGCTGCTTGGAAAAACAAGGAGCAAGAAATTGTTGAGGCTGCAATTGAATCTGTTGCTGGAGAACTCGACGTAGAGAGGAAGCTCAGGAGACGGTTTGAAAGCTTGAACAAGAAGCTTGGGAGAGAACTGGCTGACACCAAAGCATCCCTTCTTAAGGTGGTGAAAGAACTTGAAAGTGAGAAGAGAGCAAGAGAAATTATTGAGCAAGTATGTGATGAGTTAGCAAGAGATGCTGATGAAGATAAATCTGAGATTGAGAAACAAAAGAGAGTGTCTACAAAAGTTTGCGAAGAGGTAGAGAAAGAAAAGGAAATAATGCAGTTGACCGATAGATTACGCGAGGAGAGAGCTCAAAAGAAACTCTCCGAGGCAAAATATCAGCTCGAGGAAAAGAATGCAGCTGTTGATAAGCTCAGGAATCAACTTGAAGCTTTTCTAGGAAGCAAACAAGTTATTAGAGAAAAAGGTCGCAGTTCCACAACTTCCACTCACTTGAATGATGAAGAAATTGCTGCGTATCTGGGTAGAAGCCGAATAGGTTCCCATCTCATTGCAGATAAAGAAGATGATGAAGGAGAGGTTGACAATGGACTAGAATGTTGTGAGGAGGAATCTGCTGAGAGTGATCTGCATTCTATAGAGTTAAATATGGACAACAACAACAAGAGTTACAAGTGGACACACCCTTCCGAAACCAGATTCGATACGAGAAGATATCCAATTGAGGAAGAAATGAAAGGAAGTAGGAGGTCTACCTCTGGGAAAGCTTCGAGGAAAAGCACTTCCTTACAAAGGAGTATATCAGATGGAATGGAATGGGGAGTCCAAGCTGATAAGCTTCAAAATTCAGGACATGGGATAGATTGGGAAAGCTTTTATGAACTGGAAAAACAAGCTCAAGGAAAAGGTTATGGGGATGAAATGCAAGGCTATAAATCAGTGAAAGGTCTGAGGGATCAGATATTGGCCAGTTCCAAGCTTGGATCTTCAAGAGGTTATGCCAGTCCAACTAGACAGTTTTCCCAGCCTTGGCCATCACGAGATCTCCCAAATAATTTTCAGGAAAGACCTGCTTCAGCGCAGGGAAATGGTCTAAAATCAAGGTTAGGGGAAGGCCAGAATGTAAGGAAGTCCAAAAGGATACTACCGCCTTTTCTCCCACAAGGTGTTTTAATGAGCGAGGAAGATCCAATTGCCAAGGGTGATGATTGGCTCGGGTCGGGTAAGAATTATGGGGAATTCGGGGTTTAA 1896 0.4546 MDMIPGKIRKRGCSSSASSSSSVLHNYRFKRTILVGKRAGSTTPVPTWKLMTSRSPLRPLPSPKPRQVAVSARKLAATLWEMNEIPSPALSSKKGLRPRDRVARSTRSGSLPPHLSDPSHSPVSERIDRSGTGRSQKRTPSISHRQRVTEHHLGPFDSLSNVSLMEIETRSRAQTPASSAVGVKPRLKDVNQLIQEQRSDQNEINYLMKCFAEEKAAWKNKEQEIVEAAIESVAGELDVERKLRRRFESLNKKLGRELADTKASLLKVVKELESEKRAREIIEQVCDELARDADEDKSEIEKQKRVSTKVCEEVEKEKEIMQLTDRLREERAQKKLSEAKYQLEEKNAAVDKLRNQLEAFLGSKQVIREKGRSSTTSTHLNDEEIAAYLGRSRIGSHLIADKEDDEGEVDNGLECCEEESAESDLHSIELNMDNNNKSYKWTHPSETRFDTRRYPIEEEMKGSRRSTSGKASRKSTSLQRSISDGMEWGVQADKLQNSGHGIDWESFYELEKQAQGKGYGDEMQGYKSVKGLRDQILASSKLGSSRGYASPTRQFSQPWPSRDLPNNFQERPASAQGNGLKSRLGEGQNVRKSKRILPPFLPQGVLMSEEDPIAKGDDWLGSGKNYGEFGV 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02555 631 MobiDBLite consensus disorder prediction 125 139 - -
Cca03g02555 631 MobiDBLite consensus disorder prediction 45 69 - -
Cca03g02555 631 MobiDBLite consensus disorder prediction 88 153 - -
Cca03g02555 631 PANTHER GB|AAF24581.1 4 190 IPR043424 -
Cca03g02555 631 Coils Coil 272 306 - -
Cca03g02555 631 PANTHER PLANT/F24K9-26 PROTEIN 4 190 - -
Cca03g02555 631 MobiDBLite consensus disorder prediction 543 595 - -
Cca03g02555 631 Coils Coil 313 363 - -
Cca03g02555 631 MobiDBLite consensus disorder prediction 1 21 - -
Cca03g02555 631 MobiDBLite consensus disorder prediction 543 576 - -
Cca03g02555 631 PANTHER GB|AAF24581.1 190 595 IPR043424 -
Cca03g02555 631 MobiDBLite consensus disorder prediction 469 484 - -
Cca03g02555 631 PANTHER PLANT/F24K9-26 PROTEIN 190 595 - -
Cca03g02555 631 MobiDBLite consensus disorder prediction 456 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02555 Cca-Chr3 46824095 46827495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02555 - - gmx:100787903 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02555 03 46824095 46827495 Cca03g02555 03 46824095 46827495 ECH