Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02549 ATGCCGGAGATTCTGGACGGTGCAATTCGACGAGCCGTTGTAATCGGAAACGGCTTCGCCGGCGCTGAAAATCAGTGTATTGGTTTGGTTCGTGCTCTCGGTTTCTCCAACCGCCACTTCTTATTCCGCGTGACGCGGCCTCGAGGAGGAATCAATAGGTGGCTTCAATGGCTTCCGGTTTCAATCCACAAAAAGTTAGACTCCATTATCAGAATAATCTGCGGCAAATCGCGCTTTCAAACGCCTCACAAGATCGGGTTATCTAACGTGTTGGAAGCTGATGCTCGCCACATTGCGATGATGGCTCGTGAAACGTTTCACAAGGATGGACCATTGTTGGTGGTTGCATCTGGACGAGACACCATTTCTGTTGCCAGCTCCATTAAACGGTTAGCTCCAGAAAATGTTTTTCTTGTCCAGATACAACATCCAAGATTTCACCTGAATAGGTTTGATCTTGTGATTACTCCACGTCATGATTATTACCCACTGACTCCTCACGCCCAGCGGCAAATACCTTGGTTTCTTCGAAGGTGGGTGACTCCATGGGAACCCCCAGGCCGCAATGTGGCACTCACTGTGGGAGCGCTTCATCAAGCTGATTCCAATGCTCTTAGGGCTGCTGCTTCTGCCTGGCATGATGAGTTAGCAACTCTGCCAAAGCCCTTGCTTGTCGTTAATGTTGGGGGACCTTCTGGCAATTGTCCTTATGGTGTGGATCTTGCAAATAAGTTAGTGGTTATGCTTCAGAATGTTCTATGGAGCTGTGGGAGTATCAGGATATCTTTCTCCAGAAGAACTCCTGAGAAGATCTCTAAAATTTTGGTCAAAGCATTTGCAACAAATCCCAAGGTTCAAATATGGGATGGTGAAGGGCCTAATCCACATATGGGACATCTGGCTTGGGCTGATGCCTTTGTTATCACAGCTGATTCAGTTAGTATGTTGAGTGAGGCCTGCAGTACTGGGAAGCCTGTATACGTAATTGGAGCAGAACTGTGTACTTGGAAGTTTGCTGACTTCCAAAATTCATTGCAGAAGCAAGGGGTTGCTCGACCATTCACTGGGAGGGAAAATATAACTGAAAGCTGGAGTTATCCTCCATTGAATGACACTTCAGAAGCTGCTAGCCAAGTGATTGCTGCTCTTGCTCGGCGAGGATGGACTATCCATGCATAA 1179 0.4741 MPEILDGAIRRAVVIGNGFAGAENQCIGLVRALGFSNRHFLFRVTRPRGGINRWLQWLPVSIHKKLDSIIRIICGKSRFQTPHKIGLSNVLEADARHIAMMARETFHKDGPLLVVASGRDTISVASSIKRLAPENVFLVQIQHPRFHLNRFDLVITPRHDYYPLTPHAQRQIPWFLRRWVTPWEPPGRNVALTVGALHQADSNALRAAASAWHDELATLPKPLLVVNVGGPSGNCPYGVDLANKLVVMLQNVLWSCGSIRISFSRRTPEKISKILVKAFATNPKVQIWDGEGPNPHMGHLAWADAFVITADSVSMLSEACSTGKPVYVIGAELCTWKFADFQNSLQKQGVARPFTGRENITESWSYPPLNDTSEAASQVIAALARRGWTIHA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02549 392 Pfam Mitochondrial fission ELM1 20 383 IPR009367 -
Cca03g02549 392 PANTHER OS02G0535700 PROTEIN 7 391 IPR009367 -
Cca03g02549 392 PANTHER MITOCHONDRIAL FISSION PROTEIN ELM1 7 391 - -
Cca03g02549 392 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 104 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02549 Cca-Chr3 46736023 46739471 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02549 - - gmx:100801126 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02549 03 46736023 46739471 Cca03g02549 03 46736023 46739471 ECH