Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02543 ATGGACCCCACACCAACGCCATCCTTccaccgccgatcctccgaccgcctcctcgacgccttccccatttccccctccccctccgccgccgtctccgccgccgACGAGCTCAACGAGGCAGAGCTCTTCTGGGACACCGAATCGGAATCCCAAAACCCCACTCCATCGCCCAAATCCCGCTTCCGCCACTTCGATCGCCCCGTAGATTCCGGAGTCCTCGTCGTCCTCACCGAGCCCGATTCCCGCCGCAGCGTCTTCCCCGCCCCCTCCTCCGCGCGGATGATTCCCTCGCTGCCGAGGCCGCCGCCACCCTCCGATTACCTCGCCCAGTCCGCGCCTTCCAGAAAGTTCCAGCAATCGGCGCCCATGAAGGTCCCGATTCTCATCTCCGCCGGCGCCGCGCGGAGGAGGAacgccgccgacgacttcgcgcgcgtgatcgacgacgacgacgacgatgaggaGATGCTGCCGCCGCACGAAATCGTCGCCAGGGGCTCCGGCGTTTCGCCCAAAACCACGTTTTCGGTGCTGGAAGGGGTCGGGAGAACGCTCAAGGGGAGGGATCTCCGTCAGTTTTCACCTGAAAGACGTATCATATGCTGTGTGTCCAACCTGAAGAATCACAGCTTTGACTTGTGA 642 0.4953 MDPTPTPSFHRRSSDRLLDAFPISPSPSAAVSAADELNEAELFWDTESESQNPTPSPKSRFRHFDRPVDSGVLVVLTEPDSRRSVFPAPSSARMIPSLPRPPPPSDYLAQSAPSRKFQQSAPMKVPILISAGAARRRNAADDFARVIDDDDDDEEMLPPHEIVARGSGVSPKTTFSVLEGVGRTLKGRDLRQFSPERRIICCVSNLKNHSFDL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02543 213 Pfam Senescence regulator 36 192 IPR007608 -
Cca03g02543 213 PANTHER EXPRESSED PROTEIN 15 193 - -
Cca03g02543 213 MobiDBLite consensus disorder prediction 1 21 - -
Cca03g02543 213 MobiDBLite consensus disorder prediction 82 109 - -
Cca03g02543 213 PANTHER OS01G0862600 PROTEIN 15 193 - -
Cca03g02543 213 MobiDBLite consensus disorder prediction 94 108 - -
Cca03g02543 213 MobiDBLite consensus disorder prediction 44 64 - -
Cca03g02543 213 MobiDBLite consensus disorder prediction 44 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02543 Cca-Chr3 46662884 46664238 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02543 - - gmx:100799522 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02543 03 46662884 46664238 Cca03g02543 03 46662884 46664238 ECH