Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02542 ATGGCGGCATCTCTGAGAAGCCGAAACAGCTTCCACCACCTAACTCGCTTCCTCAACTCAGCGAGTCTCCCTCGTCGAAGGTGGCTGCAAACGGTAGCGTACGAAGAACTCCGGGCCCACCCGGACAAACCCTACACTTCAACGGCGGTTTTCATCCATGGCTTTTTGGGATCTTCCAGAAACTGGAGATCTTTCTCACGCAACCTCTTGGCCTCTCTCTCCAACTCCTCTCCCTCTTCCAATTGGAGGACGGTGATGTTGGATATGAGGAACCACGGGAAATCGGCGGAGAGGGAACTGAATCCGCCGCATAACATTGATAGTGCGGCCAAGGATTTGGCCGATTTGGTGAAGGCTGAAGGCTGGCCTTGGCCTGAGGTTGTTTTAGGGCACTCCATGGGTGGAAAGGTTGCTTTGCATTTTGCTGAGAGTTGTAGCCGCGGTGACTATGGCCATTCTGCTCTCTCGCCGAAACAGCAGCTCTGGGTATTGGATTCTGTCCCTGGAGAAGTGAACTCTGAAAACAGTAATGAAGAAGTCCGGGATGTTTTAGCAACCTTGCAAAGTTTGCCATCACAAATCCCATCTCGCAAGTGGCTTGTGAGTCATCTGATGGGACTTGGTTACTCTAAAGCACTGTCAGATTGGATAGGCACCAACCTGAAAAAAGTTGGTGATCATGAGACATGGATATTTGATCTTCAAAATGCTAAGGAGATGTTCGATTCTTACTGCGAGAAGTCCTATTGGAATCTATTGGAGAACCCTCCCAAAGGTATGGAAATAATAATTGTGCGTGCTGAAAAAAGTGATAGATGGGACCAAGATGCCATCGAGAGGATCCAGAAACTAGCCATTCGGGGAGAAACCGATTCTCTTGGAAAAGTTTCCTTCTGCGTTCTTCCAAATGCTGGACATTGGGTTCACGTGGACAACCCAAAGGGACTTCTTGAGATTGTGGCTTCCAAGATAGCATCCCATTAG 984 0.4888 MAASLRSRNSFHHLTRFLNSASLPRRRWLQTVAYEELRAHPDKPYTSTAVFIHGFLGSSRNWRSFSRNLLASLSNSSPSSNWRTVMLDMRNHGKSAERELNPPHNIDSAAKDLADLVKAEGWPWPEVVLGHSMGGKVALHFAESCSRGDYGHSALSPKQQLWVLDSVPGEVNSENSNEEVRDVLATLQSLPSQIPSRKWLVSHLMGLGYSKALSDWIGTNLKKVGDHETWIFDLQNAKEMFDSYCEKSYWNLLENPPKGMEIIIVRAEKSDRWDQDAIERIQKLAIRGETDSLGKVSFCVLPNAGHWVHVDNPKGLLEIVASKIASH 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02542 327 Gene3D alpha/beta hydrolase 22 327 IPR029058 -
Cca03g02542 327 Pfam Alpha/beta hydrolase family 50 316 IPR000073 -
Cca03g02542 327 PANTHER 2-SUCCINYL-6-HYDROXY-2,4-CYCLOHEXADIENE-1-CARBOXYLATE SYNTHASE 1 326 - -
Cca03g02542 327 PANTHER PROLYL AMINOPEPTIDASE-RELATED 1 326 - -
Cca03g02542 327 SUPERFAMILY alpha/beta-Hydrolases 32 324 IPR029058 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02542 - - gmx:100801322 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02542 03 46657521 46661760 Cca03g02542 03 46657521 46661760 ECH