Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02531 ATGATATTGTTAAGCGACACAATCACAAATAATGGAAGAGCAGTTGTTGAGGTAAAAAAATTGGTCTTGTCTCGATTGGTCCTAGCGGATAACATCCGGGCTTCTTCTGTTTGCAAGAGATGGCATTCTGTTGCGAGTGCTCGTAAGACACACTCCCTTGAGTTGCCCGAGTTGAATGGATCTAGAGTTTGTTATACCAAGGATGGTTGGTTATTGTTATACCGGCCTAGAACTCACCGAGTATTCTTCTTTAATCCCTTTACTAGGGAGCTGATTAAACTGCCAAGATTTGAGATGACATACCAGATTGTTGCCTTCTCTTGTGCTCCAACATCACCCGGCTGTGTTCTGTTTACTGTTAAGCATGTTAGTCCTACTGTTGTAGCTATTAGCACTTGCTATCCTGGGGCAACAGAATGGACCACTGTTAATTATCAAAATCGCTTGCCCTTTGTCAGTAGCATTTGGAATAAGCTTGTGTTTTGTAATGGGTTATTTTATTGTCTGAGTCTCACAGGTTGGCTCGGTGTGTTTGACCCAGTTGAATGTACTTGGAGTGTCCTTGCAGTACCTCCACCCAAATGCCCAGAGAACTTTTTTGCCAAAAACTGGTGGAAGGGGAAATTTATGACGGAGCATGAAGGGGATATAATAGTAATTTACACATGTTGTAGTGAAAACCCCATTATTTTTAAGTTAGATAAGACATTAATGAAATGGGAAGAGATGACAACACTAGATGGAGTAACGCTTTTTGCTAGTTTTTTGTCATCACATTCAAGGACTGACCTCGTAGGAATAATGAGGAATAGTGTCTACTTCTCTAAAAATTTTAGTGAACAAAGCTTTTGTTTCAACGAGAAGTCCTAG 870 0.4046 MILLSDTITNNGRAVVEVKKLVLSRLVLADNIRASSVCKRWHSVASARKTHSLELPELNGSRVCYTKDGWLLLYRPRTHRVFFFNPFTRELIKLPRFEMTYQIVAFSCAPTSPGCVLFTVKHVSPTVVAISTCYPGATEWTTVNYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFDPVECTWSVLAVPPPKCPENFFAKNWWKGKFMTEHEGDIIVIYTCCSENPIIFKLDKTLMKWEEMTTLDGVTLFASFLSSHSRTDLVGIMRNSVYFSKNFSEQSFCFNEKS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02531 289 PANTHER OS09G0392200 PROTEIN 47 285 - -
Cca03g02531 289 SUPERFAMILY F-box domain 17 80 IPR036047 GO:0005515
Cca03g02531 289 PANTHER OS09G0392200 PROTEIN 47 285 IPR044619 -
Cca03g02531 289 PANTHER OS09G0392200 PROTEIN 17 46 - -
Cca03g02531 289 Gene3D - 17 50 - -
Cca03g02531 289 PANTHER OS09G0392200 PROTEIN 17 46 IPR044619 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02531 Cca-Chr3 46573987 46576878 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02531 - - gmx:100796538 523.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02531 03 46573987 46576878 Cca03g02531 03 46573987 46576878 ECH