Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02528 ATGGGCTGCGTCTCCTCAAAACACATGAAGAAGGACCTGAAGCAGGAACATGTCCCCGACACCAATGGCTACGGTTACGTCAACCACGTCGTTTCCCTCACTTCCTCCACCTACGGAGCACTAACGTTGGACAAAGAAAAAGACCAACCCACAAACACCGTCGAAGAATCGAAAACATCCCCTCCTCGTACTCACCAACAACCCGAAGTCATCAACGCGTGGGAACTCATGGAGGGTCTCGAAGAGGGAGCACCCATTTCCAAAAAAAGCCCCAAGTCCACGCCTTTCCTTCGCGGCTTCACCGCCGCCGACGCCAAAACCCCTTTCAAGTTCCTCACCCAATTTGGGTCCCCCAAATCCCTAAAAAAATTCACAGGTAAGGAAAACATGGGAATTCTCAAACCCACTGCAGGTGTGAGACGCTTGAACTACAATTTCAGCCCCAAAGGGATTCTCAAACCCTCCAATTCTTCTCCAATTAGAAGGAACAGTTTCGGGAGTGATATCAAGAGGAGAAGCCCGAGTCCTCTGTTTGATCCAGAGCTTCTCGCGTCCTACGAAAAGGAACTCTCAGAAGAGGAGGAACAGATCAAGAGAATGGTGTGGGCCACACCCAAAACCCGAAGAGTGAGAAAATCTTTGGATTCACAATCTTTTATCAACACTTTTGAGCAAAAGTGTCCTCCGGGAGGGGAAAACTCCGTTGTGATTTACACCACCACGTTACGGGGAATAAGAAAGACGTTTGAGGAGTGCAATAAGGTTAGGTGTGTTATTGAGTCCTATTGCGTGCACGTGGTGGAGCGTGACGTGTCGATGGATTCGGGGTTTAAGGAGGAGTTGAGGAAGCTGATGGGGACAAATGAAGTTAAGGTTCCTGTTGTGTTTGTGAAGGGAAGGATCGTTGGTGGTGCTGAGGAAGTTGTGAAGTTGGAAGAAGAGGGAAAGTTGGGGGTTCTGTTTGAGGGGTTACCACCGAAGGCGTTGGAGGAGTGTGGAGGGTGTGGGGGTGTGAGGTTTGTCATGTGTGTGGAGTGCAATGGGAGTTGTAAGGTTTTGGATGGGAATGGCAAGAAGACTCTGAGGTGTGGACAGTGTAATGAGAATGGATTGGTTCAATGTCCGTTGTGTCGTTGA 1137 0.4934 MGCVSSKHMKKDLKQEHVPDTNGYGYVNHVVSLTSSTYGALTLDKEKDQPTNTVEESKTSPPRTHQQPEVINAWELMEGLEEGAPISKKSPKSTPFLRGFTAADAKTPFKFLTQFGSPKSLKKFTGKENMGILKPTAGVRRLNYNFSPKGILKPSNSSPIRRNSFGSDIKRRSPSPLFDPELLASYEKELSEEEEQIKRMVWATPKTRRVRKSLDSQSFINTFEQKCPPGGENSVVIYTTTLRGIRKTFEECNKVRCVIESYCVHVVERDVSMDSGFKEELRKLMGTNEVKVPVVFVKGRIVGGAEEVVKLEEEGKLGVLFEGLPPKALEECGGCGGVRFVMCVECNGSCKVLDGNGKKTLRCGQCNENGLVQCPLCR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02528 378 ProSiteProfiles Glutaredoxin domain profile. 223 328 - -
Cca03g02528 378 Gene3D Glutaredoxin 231 322 - -
Cca03g02528 378 SUPERFAMILY Thioredoxin-like 228 321 IPR036249 -
Cca03g02528 378 MobiDBLite consensus disorder prediction 1 21 - -
Cca03g02528 378 Pfam Glutaredoxin 235 302 IPR002109 -
Cca03g02528 378 CDD GRX_GRX_like 234 374 - -
Cca03g02528 378 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 1 377 - -
Cca03g02528 378 PANTHER EMB|CAB85507.1 1 377 - -
Cca03g02528 378 Coils Coil 183 203 - -
Cca03g02528 378 MobiDBLite consensus disorder prediction 41 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02528 Cca-Chr3 46533636 46535155 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02528 K17479 - gmx:100781497 585.489