Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02526 ATGTTTCCGCTTTCCAACCCTTCTCTTTCTCTGCAATCTAGCATCGTCGCACCGATTCCAGCAAAACCTACCAAACACTCTTCCACTCTCTCCGTCACCAACTCCGCGTCTTCCGGCGAGAGAATCACCGCAGCTCGCCGGAGAACCATCTCGCCCTTCGAAGCCAGAATCTCACTCGTCTTCGCCCTCGCTTCTCAAGCCAACTCTCTCTCCCAGCGACTTCTAGCGGACGTGGCTGGCGAGACTGCGAAATACGTGTTTCCGAAGAGATTTGAAAGCCGCACTCTCGAGGAGGCGTTGATGAGTGTTCCGGACCTTGAGACTGTCCAGTTCAAAGTTCTGAGTAGAAGGGaccagtatgagattagggaagttcagCCTTACTTTGTGGCAGAGACAACAATGCCTGGGAAGAGTGGGTTTGATTTCAATGGTGCTTCTCGGTCGTTTAATGTCTTAGCTGAGTACCTTTTCGGTAAGAATACAATGACGGAGAAAATGGAGATGACTACACCTGTTTATACAAGTAAAAATCAACCTGATGCGATTAAAATGGATATGACAACTCCTGTGTTAACAACAAAGGTGGAAGATCAAGATAAGTGGAAAATGTCTTTTGTCATGCCATCAAAGTATGGTGCTAACTTGCCACTGCCTAAAGATTCCTCTGTGAGAATTAAAGAGGTGCCCAGAAAAATAGTTGCTGTAGTTTCCTTTTCAGGTTTTGTGAATGATGAAGAAGTTAAGCAGCGCGAACTGAAACTACAAGAAGCTTTAAAAAGTGACAGTCAGTTTAAAATTAAAGAGGGAACTTCAGTAGAAGTTGCACAGTATAATCCACCATTTACTCTTCCATTTCAACGCCGTAATGAGATTGCACTGGAGGTGGAATGGAAAACTAAGTAA 906 0.4371 MFPLSNPSLSLQSSIVAPIPAKPTKHSSTLSVTNSASSGERITAARRRTISPFEARISLVFALASQANSLSQRLLADVAGETAKYVFPKRFESRTLEEALMSVPDLETVQFKVLSRRDQYEIREVQPYFVAETTMPGKSGFDFNGASRSFNVLAEYLFGKNTMTEKMEMTTPVYTSKNQPDAIKMDMTTPVLTTKVEDQDKWKMSFVMPSKYGANLPLPKDSSVRIKEVPRKIVAVVSFSGFVNDEEVKQRELKLQEALKSDSQFKIKEGTSVEVAQYNPPFTLPFQRRNEIALEVEWKTK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02526 301 SUPERFAMILY Probable bacterial effector-binding domain 176 296 IPR011256 -
Cca03g02526 301 Gene3D Regulatory factor, effector binding domain 179 301 IPR011256 -
Cca03g02526 301 Gene3D Regulatory factor, effector binding domain 105 178 IPR011256 -
Cca03g02526 301 PANTHER OS02G0533200 PROTEIN 23 300 - -
Cca03g02526 301 Pfam SOUL heme-binding protein 106 294 IPR006917 -
Cca03g02526 301 PANTHER HEME-BINDING PROTEIN-RELATED 23 300 IPR006917 -
Cca03g02526 301 MobiDBLite consensus disorder prediction 21 43 - -
Cca03g02526 301 SUPERFAMILY Probable bacterial effector-binding domain 101 176 IPR011256 -
Cca03g02526 301 MobiDBLite consensus disorder prediction 24 43 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02526 - - ccaj:109796809 563.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02526 03 46513866 46519057 Cca03g02526 03 46513866 46519057 ECH