Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02520 ATGGCTCACCACACTCCTTCTCATCCATCTAAAGACATCACCAACATGGAGGAGCAGCAACAACAAGAGTCTTTGACCAACCTTAGCCATGATGACAGAGATAACAAGGATGTTACACAAAACCCATGTGCTTCAAAACCCCTTGAGGCATTGCAAGAAGAAACGAGTGTGGCAGAGGATAGTGGACGAGAGAGGCTGAAACGGCATAGAGTTGAAGTGGCTGGAAGAGTATGGATTCCTGATATATGGGGTCAGGAGGATCTCTTGAAGGATTGGATAGATTGCGCTGCATTTGATGCTCCTTTAGTTCCAAGCAGAATCTCCACTGCTAGAGAGGCTTTGGTTCAAGAGTGTACAAGACCCAATGCCATTGCTGCTCGACTAAGAATAGATAACAGGGACCTGGATTTCAATGTACATATGGATTTATCCCTTAATAACAACTGCACAAATGTAGAGGTTCAAAACACCCGCACGTTTTCAGACACCGAGAAGAGCACCTAA 504 0.4504 MAHHTPSHPSKDITNMEEQQQQESLTNLSHDDRDNKDVTQNPCASKPLEALQEETSVAEDSGRERLKRHRVEVAGRVWIPDIWGQEDLLKDWIDCAAFDAPLVPSRISTAREALVQECTRPNAIAARLRIDNRDLDFNVHMDLSLNNNCTNVEVQNTRTFSDTEKST 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02520 167 PANTHER PROTEIN BIC1 10 133 - -
Cca03g02520 167 MobiDBLite consensus disorder prediction 8 26 - -
Cca03g02520 167 PANTHER PROTEIN BIC1 10 133 IPR040374 GO:0009785
Cca03g02520 167 MobiDBLite consensus disorder prediction 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02520 Cca-Chr3 46484418 46488388 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02520 - - ccaj:109796623 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02520 03 46484418 46488388 Cca03g02520 03 46484418 46488388 ECH