Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02518 ATGGCTTCTAAGGCAATGAGCGTCGCAGCGGAGAAGATAGGGGCGGCGGCCCGACGCCAGGCAGTGACGTTGACGGACGCCGCCGCCTCACGAATACGCCACTTGCTACAGCAGCGCCAGAGGCCCTTCCTGAAGCTCGGAGTCAAGGCTCGCGGCTGCAACGGCTTATCCTACACCCTTAATTACGCAGATGAAAAAGGGAAGTTTGATGAGTTGATTGAGGATAAGGGTGTTAAGATATTGATTGATCCAAAGGCCCTTATGCATGTCATTGGAACTAAAATGGATTTTGTAGATGACAAACTGAGATCGGAATTTATCTTTGTGAATCCAAATTCTAAAGGTCAGTGTGGTTGTGGTGAATCTTTCATGACAACAGCCAGTAGTGGATCTTCTAAGCCATGA 405 0.4889 MASKAMSVAAEKIGAAARRQAVTLTDAAASRIRHLLQQRQRPFLKLGVKARGCNGLSYTLNYADEKGKFDELIEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFIFVNPNSKGQCGCGESFMTTASSGSSKP 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02518 134 PANTHER IRON-SULFUR ASSEMBLY PROTEIN ISCA-LIKE 3, MITOCHONDRIAL 3 133 - -
Cca03g02518 134 SUPERFAMILY HesB-like domain 21 114 IPR035903 -
Cca03g02518 134 PANTHER IRON-SULFUR CLUSTER ASSEMBLY PROTEIN 3 133 - -
Cca03g02518 134 ProSitePatterns Hypothetical hesB/yadR/yfhF family signature. 106 123 IPR017870 -
Cca03g02518 134 Pfam Iron-sulphur cluster biosynthesis 22 121 IPR000361 -
Cca03g02518 134 Gene3D - 21 127 IPR035903 -
Cca03g02518 134 TIGRFAM TIGR00049: iron-sulfur cluster assembly accessory protein 22 124 IPR016092 GO:0016226|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02518 K22063 - gmx:100777750 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02518 03 46467000 46472924 Cca03g02518 03 46467000 46472924 ECH