Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02512 ATGGCTAATAAAGAGTTCAAAGTCCCGCCGGTGGCTTTCCCCTCCGCCGGAAACCCCGCCGCGCCGGCCCCAAACCTCCAGCAGCGGCGCGTGCCCAATCCGCCGTTCCAGCCGAACTCCGGCATCCCCTTCATGTCCTTCGACATAGGCTCCGCCGCGGCGTCCACCTCCTCGGGGCCAATATACAGCGGCCCCGCCGTGGGCGGAGGTGGCGCCAACTTCGACGACGAGGAGCCGCTCCTGGACGAGCTCGGGATCCACCCGGAGCAAATCTGGAGCAAAATCAGATCCGTACTGAACCCGTTTCGGGTGAACCACTCGGTCCACAAAGACTCGGATCTATCGGGCCCAATTCTTCTGTACATGTCCCTTTGCCTCTTCCAATTACTCGCGGGGAAGATCCAATTCGGCGTCATATTGGGCTGGATCGTCGTCTCTTCAATCTTCCTTTACGTCGTTTTCAACATGTTGGCCGGTCGAACCGGTAACCTTGATTTGCACACCTGCACCAGCGTCGTCGGTTACTGCATGTTGCCGGTGGTCATCTTCTCCGCGCTCTCGCTCTTTTTACCGGTCGACGGGGTCATTCGCCTTTCGGTCGCTGCGGTTTTCGTGTTGTGGGCGACGAAAGCTTCCACGGGGCTCGTCGTGTCGCTCGCCGACGGCGGCGACGAGCATCGCGGCCTCATAGCatttctaaagctatcttga 711 0.5893 MANKEFKVPPVAFPSAGNPAAPAPNLQQRRVPNPPFQPNSGIPFMSFDIGSAAASTSSGPIYSGPAVGGGGANFDDEEPLLDELGIHPEQIWSKIRSVLNPFRVNHSVHKDSDLSGPILLYMSLCLFQLLAGKIQFGVILGWIVVSSIFLYVVFNMLAGRTGNLDLHTCTSVVGYCMLPVVIFSALSLFLPVDGVIRLSVAAVFVLWATKASTGLVVSLADGGDEHRGLIAFLKLS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02512 236 PANTHER PROTEIN YIPF 4 233 - -
Cca03g02512 236 MobiDBLite consensus disorder prediction 1 37 - -
Cca03g02512 236 PANTHER GOLGI MEMBRANE PROTEIN YIP1 4 233 IPR045231 GO:0006888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02512 Cca-Chr3 46419326 46420792 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02512 K20363 - gmx:100775605 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02512 03 46419326 46420792 Cca03g02512 03 46419326 46420792 ECH