Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02511 ATGGCGGTTCGAATATGTGTGCTTTTGCTTTTGCTAATCATCGGAATCGTCGAACTCGATGCCGTTTATGGTTACATTCGACCACCACCTCGTGAAACTCTCTATGTTCCAAATGCAGATGAAGACCCCAACACGCCTCAACAGGTGCACATATCTCAAGTGGGCCAAAATATGATGAGGATATCGTGGATCACAGGGAGCCCAACTCCAGCAAAGGTTTCGTACGGTCCATCCCCTTCGGCCAACGCAGAGTCTGCGACAGGGAACACTTCTTCATACCATTTTCTGCTTTACGAATCCGGTCAAATCCACGAAGTCGTAATTGGCCCCCTCAACCCCAACACCGTCTACTACTACCGTTTGGGTGACCAACCCTCTTCCCAAACACGACAATTCAAGACCACACCCTCCCAATTCCCAATCAAGTTCGCAGTAGTTGGGGACCTTGGACAAACGGATTGGACTAGGTCAACTTTGGAACACGTGGGTAAGTCAAACTACGACATGTTAATACTACCGGGGGACTTATCCTACGCAGACTTGGACCAAGTTTTATGGGACTCCTTTGGTCGATTGGTTGAGCCATTGGCTAGCCAGCGTCCTTGGATGGTCACCCAAGGAAACCACGAGGTGGAGAAGATTCCGTTGATTCACAGAACGCCGTTCACAGCGTACAATGCGAGATGGCGCATGCCGTTTGAAGAGAGTGGGTCAGACTCTAACCTCTACTATTCCTTTGACGTGGCTGGAATTCACGTGATCATGCTTGGCTCCTACGCCGACTTTGACGCTTCCTCTCCACAGTACCGATGGCTTCAAGGGGACTTGGGAAAGGTGAACAGAGGGAAAACTCCTTGGCTTGTGCTGCTCATCCACGCACCCTGGTATAACTCCAACACCGCTCACCAGGGTGAGCCTGAATCCGTTCACATGAAAGCTGCAATGGAAGGTTTGCTCTACCATGCCCGTGTTGATCTTGTTTTTGCAGGACATGTTCATGCCTATGAACGATTTACACGAGTTTACGAAGATAGAGCTAACAATTGCGCTCCGGTGTATATCAATATCGGGGATGGGGGTAACCGTGAAGGCCTGGCATCCAAGTACATAGATCCCAAGCCAGAGATATCCATATTCAGGGAGGCTAGCTTTGGGCATGGTGTACTTGAAGTAGTTAATGCATCACATGCACTTTGGACATGGCATAAGAACGATAACGATGAAGCAGTTGTTAGTGATTCTATCTGGATTACAAGTTTCTCCTCTAATCCTTGCAAACAGTGA 1284 0.4875 MAVRICVLLLLLIIGIVELDAVYGYIRPPPRETLYVPNADEDPNTPQQVHISQVGQNMMRISWITGSPTPAKVSYGPSPSANAESATGNTSSYHFLLYESGQIHEVVIGPLNPNTVYYYRLGDQPSSQTRQFKTTPSQFPIKFAVVGDLGQTDWTRSTLEHVGKSNYDMLILPGDLSYADLDQVLWDSFGRLVEPLASQRPWMVTQGNHEVEKIPLIHRTPFTAYNARWRMPFEESGSDSNLYYSFDVAGIHVIMLGSYADFDASSPQYRWLQGDLGKVNRGKTPWLVLLIHAPWYNSNTAHQGEPESVHMKAAMEGLLYHARVDLVFAGHVHAYERFTRVYEDRANNCAPVYINIGDGGNREGLASKYIDPKPEISIFREASFGHGVLEVVNASHALWTWHKNDNDEAVVSDSIWITSFSSNPCKQ 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02511 427 Gene3D - 45 137 - -
Cca03g02511 427 Pfam Calcineurin-like phosphoesterase 142 335 IPR004843 GO:0016787
Cca03g02511 427 Gene3D - 138 427 IPR029052 -
Cca03g02511 427 PANTHER PURPLE ACID PHOSPHATASE 11 425 - -
Cca03g02511 427 Pfam Iron/zinc purple acid phosphatase-like protein C 350 410 IPR025733 -
Cca03g02511 427 SUPERFAMILY Metallo-dependent phosphatases 140 408 IPR029052 -
Cca03g02511 427 PANTHER ACID PHOSPHATASE RELATED 11 425 IPR039331 GO:0003993
Cca03g02511 427 CDD FN3 43 134 IPR003961 GO:0005515
Cca03g02511 427 Pfam Purple acid Phosphatase, N-terminal domain 46 134 IPR015914 GO:0003993|GO:0046872
Cca03g02511 427 CDD MPP_PAPs 137 419 IPR041792 -
Cca03g02511 427 SUPERFAMILY Purple acid phosphatase, N-terminal domain 33 136 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02511 Cca-Chr3 46408279 46413158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02511 44 386 Miscellaneous Gene Families AT2G03450 26.150 4.36e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02511 K22390 - gmx:100794764 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02511 03 46408279 46413158 Cca03g02511 03 46408279 46413158 ECH