Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02510 ATGTATTCCTTATCACACTGTGTATCTTGCGCAACCCCATCATATAATAGTAGCCCCCCCACACCCAAAACGAGTTGCAGCTACAAATTGCATGAACCAACAATTCCAAGCCAAAAGAAGAAGATGATAGGAAAATATAGAAAGACCCTTATGGTATTCCCGATCCTCCTACACTTCCTCTTGTTCCCACAACCCCTTCTTTCTCAAGACAACAATAACTTTGTTCGTCAGCCAGCTGGTCAACTCATTATCACTCCCCACCAACGATCCAATTCGGAACCCCAACAGGTGCACATTTCATTGGTGGGGAAAGAGAAGATGAGGGTGTCGTGGATAACCGAAGAGAAGCAGGCGGAATCCGTGGTGGAGTATGGAACAAAGTCAGGGGAATATAGCGCCAAAGCAACGGGGGAGCATACCTCGTACCAATATTTTTTCTATACCTCGGGCCAGATCCACAACGTTGTTATTGGGCCTTTGCAGCCATCTACTACTTACTACTACCGTTGCAGTGCCTCTGGTCCTGAGTTTTCCTTCAAGACACCCCCACCCAACTTGCCCATTCAGTTTGTCATCGTTGGTGACTTGGGACAAACAGAATGGACTGCATCAACCTTAAAACATGTTGACAGCAGCGACTACGACGTGTTCCTGTTACCTGGAGACCTATCCTATGCAGACTCCCAGCAACCCTTATGGGACTCCTTTGGTCGTTTAGTGGAACCATATGCTAGTAAAAGGCCATGGATGGTTACTGAAGGGAACCACGAGATCGAGATTTTCCCCATCATCTACCCCAAAGGCTTCGAGGCCTACAACGCTCGCTGGCCCATGCCCTTCCAACAAAGTGCTTCCACCTCCAACCTCTATTACTCCTTCGAGGTTGCCGCCACCCACGTCATCATGCTAGGTTCCTACACTGATTTTGACCACCAATCAGACCAATACACGTGGCTTCAATCTGACCTCGCCAACATTGATAGGGCCAAGACACCTTGGGTGATTGTGCTGCTTCATGCACCTTGGTATAATACTAACGAGGCACACCAAGGTGAAGGCGAATCCATGAGACAAGCCATGGAGGAGTTGCTTTATAATGCTCGCGTTGACTTGGTTTTTGCTGGCCATGTTCATGCTTATGAACGCTTCACTCGAATTTACGACAATAAGGCTGATTCATGTGGACCGATGTATGTGACTATTGGGGATGGAGGAAACCGCGAGGGACTTGCCTTAACGTTTAAGAACCCTCCTAGCCCGCTATCGTTGTATCGAGAGTCAAGCTTTGGACATGGAAGGTTACGGATACTAAATGAAACACATGCGCATTGGTCATGGCACCGAAACAATGATTCTGACGCGGTTGTGGCTGATGGTGTTTGGATAGAGAGTTTAAGCAGCTCGAAAGCATGCTCAAAGATACCAGAGCAACAAGATGCTGCTCATGAAGAGCTATAA 1458 0.4767 MYSLSHCVSCATPSYNSSPPTPKTSCSYKLHEPTIPSQKKKMIGKYRKTLMVFPILLHFLLFPQPLLSQDNNNFVRQPAGQLIITPHQRSNSEPQQVHISLVGKEKMRVSWITEEKQAESVVEYGTKSGEYSAKATGEHTSYQYFFYTSGQIHNVVIGPLQPSTTYYYRCSASGPEFSFKTPPPNLPIQFVIVGDLGQTEWTASTLKHVDSSDYDVFLLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPIIYPKGFEAYNARWPMPFQQSASTSNLYYSFEVAATHVIMLGSYTDFDHQSDQYTWLQSDLANIDRAKTPWVIVLLHAPWYNTNEAHQGEGESMRQAMEELLYNARVDLVFAGHVHAYERFTRIYDNKADSCGPMYVTIGDGGNREGLALTFKNPPSPLSLYRESSFGHGRLRILNETHAHWSWHRNNDSDAVVADGVWIESLSSSKACSKIPEQQDAAHEEL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02510 485 SUPERFAMILY Metallo-dependent phosphatases 187 451 IPR029052 -
Cca03g02510 485 Pfam Iron/zinc purple acid phosphatase-like protein C 395 454 IPR025733 -
Cca03g02510 485 PANTHER PURPLE ACID PHOSPHATASE 30 476 - -
Cca03g02510 485 Gene3D - 185 472 IPR029052 -
Cca03g02510 485 SUPERFAMILY Purple acid phosphatase, N-terminal domain 85 183 IPR008963 GO:0003993|GO:0046872
Cca03g02510 485 PANTHER ACID PHOSPHATASE RELATED 30 476 IPR039331 GO:0003993
Cca03g02510 485 Pfam Purple acid Phosphatase, N-terminal domain 94 181 IPR015914 GO:0003993|GO:0046872
Cca03g02510 485 Pfam Calcineurin-like phosphoesterase 189 380 IPR004843 GO:0016787
Cca03g02510 485 CDD MPP_PAPs 187 464 IPR041792 -
Cca03g02510 485 Gene3D - 93 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02510 Cca-Chr3 46386380 46389727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02510 92 481 Miscellaneous Gene Families AT2G03450 26.271 2.34e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02510 K22390 - gmx:100819446 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02510 03 46386380 46389727 Cca03g02510 03 46386380 46389727 ECH