Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02508 ATGGCCTCTCTAGTCAACAACGCTCACGGTGGCCTCAACGGTGCCATCGGAAACGCTGAAAAGCTCATTATCGATACCGATCCCGGAATCGATGATAGCATGGCCATTTTGATGGCTTTTCAATGTCCAGAGGTGGAGATTCTGGGTTTGACATCCATCTTCGGTAATGCAACTACTGAAATTGCCACACGCAATGCTTTGCTCTTGTGTGAGATCGCTGGCCGTGAAAATGTTCCAGTTGCAGAGGGCAGCTCTGAGCCATTGAAGGGTGGAACGCCTCGTGTTGCTGATTTTGTTCACGGTGAAGATGGACTGGGGAACACATTTCTGCCCCCACCTAATGCTAAGAAAATTGAGAAGAGTGCTAGTGAGTTTTTGGTTGAGAAGGTCTCAGAATATCCTGGTGAAGTAACTGTGCTAGCACTTGGACCACTAACGAATTTGGCTTTGGCAATCAAAAGAGATTCTTCATTTGCAAGCAAAGTGAAGAGAATAGTTATACTTGGTGGGTCATTCTTTGCCTTGGGGAATGTGAATCCTGCTGCAGAAGCAAATATCCATGGAGACCCAGAAGCAGCAGATACCGTGTTTACCTCGGGGGCAAATATTGTTGTTGTTGGAATAAACATTACAACCCAAGTTAAATTCACAGATGCTGATCTCCTTGAACTGAAGGAATCTAAAGGAAAGTATGCTCCTCTCTTAAGTGACATGTGCAAATTCTATAGGGACTGGCATGTAAAATCTGACGGTGTCTATGGAGTTTTCCTCCACGATCCTGTCAGTTTTGTGGCAGTTGTACGTCCAGATCTTTTCACATACAAGAAGGGGGTAGTGAGGGTAGAGACACAAGGCATCAGTGTTGGGCATACACTTATGGACCAAGGATTGAAAAAATGGAATACGAGCAACCCATGGACGGGTTATTCTCCTGTTTCAGTTGCTTGGACTGTGGATGTTGACGGAGTTCTTGATTATGTCAGGGAGCTGTTGATGAAACCCTGA 1005 0.4537 MASLVNNAHGGLNGAIGNAEKLIIDTDPGIDDSMAILMAFQCPEVEILGLTSIFGNATTEIATRNALLLCEIAGRENVPVAEGSSEPLKGGTPRVADFVHGEDGLGNTFLPPPNAKKIEKSASEFLVEKVSEYPGEVTVLALGPLTNLALAIKRDSSFASKVKRIVILGGSFFALGNVNPAAEANIHGDPEAADTVFTSGANIVVVGINITTQVKFTDADLLELKESKGKYAPLLSDMCKFYRDWHVKSDGVYGVFLHDPVSFVAVVRPDLFTYKKGVVRVETQGISVGHTLMDQGLKKWNTSNPWTGYSPVSVAWTVDVDGVLDYVRELLMKP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02508 334 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 18 334 IPR023186 -
Cca03g02508 334 SUPERFAMILY Nucleoside hydrolase 20 331 IPR036452 GO:0016799
Cca03g02508 334 Pfam Inosine-uridine preferring nucleoside hydrolase 22 324 IPR001910 GO:0016799
Cca03g02508 334 PANTHER URIDINE NUCLEOSIDASE 1 18 334 - -
Cca03g02508 334 CDD nuc_hydro_CaPnhB 21 332 - -
Cca03g02508 334 Gene3D - 14 334 IPR036452 GO:0016799
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02508 Cca-Chr3 46365692 46368912 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02508 K01240 - gmx:100818908 589.726