Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02496 ATGGAGGTCTCACACGACGATGACGACGACCACATTATCCTGCTCTGCACCAACACTGATCCAATCGAAACAACGCAAACCCTAAACGATGAGATTCTCGTGTCTACCACAGATATCCTCGCTTGGGATTTCCCAACCATTCTCACCTTCCCGACGATTAAGGTTCAGGCACACCGCAATAGGCTCGTTGAACAATCTCTGTATTTCCGTGGTCTTCTCGACGGGAGCTTCAGCGAATCATGCTTGGGCTCTATCACTATCAATTGGAATGTGAGCGAATTTTTGCAAATTCTCAAGCATATGTGTGGCTGCGTGTTGGATATTGCACTGGATAATTTCTTCCCTCTTTATGAGGGTGCGCTTTATTTTGGAGTGGAGACACTTCTCTTGAAGTGTGAGACATGGCTTTCTGAGGCATTCTCACCTAAAGGGTTTCAATCTACTCAAATACAACTAGAGGACTTGATTCAAATTTGGAAATTTGGCTCGGACCTTGCAAGTGACTTTATCCTGCACTTATGTATGGGCTACCTAGCAAGAAATTTTATGTGGGCAAAGCATAGCAATTTTTTTGGAAAACTTCCATATGACTTGCTGTTATCTTCAGTAAAGCACCCTCACTTGACTGTTGACAGTGAGCTGCATGTTTCTGATGCACTTCTTCTCTGGCTTGAAAGTAACTTGGAAAATTTTGAGAGGCCAAGCAAAGCTGAAGACGACTGCAATGAAATTTTGAAACAAATTCGTGTAGGCCTTTTGCCTTTGTGGTTTGCTCTAGGAAAAAGAAACTCCCTTTATTTTAAACAGCTGGCTGAGGAAAGCCTTGATTCAATTTTCAGACTATTAAATATTGTTCCTATGGGTTCACTGGATACTTTTGAGTATAGAGACTTGCATCATCTCAGGATTAGGCTGACAGAATATTCGAAGAGAGTGAACCTTTCTGGTTGCCCGCAAATAACATCTACCATACTTCTTCTGTCACTCATCCCTCAATCATGTTTAACAGATCCCATGCAAAAGAATATTATAAAACAATTGTTTATTAATTGTGGTCATCCTATAAGAGATAAATGTGTGTTCACACAAAATCTGTCAAAAACCTTAACCTTTGAAGCAGTTCAGGAGGTGGATATCTCTAAGTGTCGATATTTGCTTATTGAACATGCTGTTGATTGCTTCTGCAAGTCCTTTCCTTCTTTAAGAATATTAAAAGCAGCTTATCTTTTGCACATTGGGACAATCAGTTTCCTTCAATTATTGGAGACACGTCCTATGGTCTGCGAAATTGACTTGACTGTTGATATTACCCCAGTGGTACCGGCATTATTTACAGTTTTATCCTCTAGTTCTGCTGTGCTACCACGGGTACCAGAGAAGCCTTATGAAGAAGTGAAAATCATGCTATTTAATAGATTTGGACCACCTCTTTCTAACGTTACAAAACTCACATTGGAAGGAAGAACTGATGTCAGTGATTTGGGTCTTCGCTACATCTCCAAATTATGTGGTTCATTGCGTCACCTGAATATTAAAGGATGCATTTCTGTCACCGATATTGGAATATCAGACCTCATATCCACGTGTAGAAAACTTAATTCTATTGTGACTTGTGATACTTCATTTGGGATAAATTCAGTTCAAGCTCTTTGCTCAGCTATTGATAGTAGCAACTTCCCCTCGGTACACGCTATAGGTATTTCTGTGGTGTCTAATTTGGAAACACTGCATATGGGTGGCTGCAGGGGTGTTTGTGAGTCATCTCTACTAGAGCTTATGTCTCAAACACAAGTTTTGAAGAGTTTATGCCTGAGAGGGACTGACCTGGTTGACCAGGCACTGTATAATTTTGTAGGTTCTTCCTTGGAGATGCTTGATGTTTCAAACACTAAGATTTCTGGGGCTGCATTAGCTTATGTTATTCATGGAAATCCACGCTTAAAGTGTCTGAAAGCAAGAGACTGTAAAAATTTGTTTCCGGGAGACAATTGTGTTGAAAAGAGAGAATCTAGCTTTTCCTCTTTGCATGAAAAACTACATGCTGATTTAGGAAAAATGTGTAGATTGGAAGAAATTGAATTTGGATGGGGCTTTTCTTCCTTCTCTTTGAGTGCTCTGGAACCTGCACTGATGTCATTAAAAACCATCAATGTAGGTTTAGGTGGAATGTTGGGTGAAGATGCTTTGAAACAATTACCTGCAATCTGCCCCTTGTTAGAAACAATAATCCTTCATTTTCAGGTAATATCTGATATTGTTGTGATAAACTTAATTACTTCCTTGAAAAACTTGCAAGAATTAGCTATGTGCTATTGTTTTGGTGATATATCCATGTCAAGCTTCAAATTCCCTATGCAAAATCTAACAAAGTTGAGACTTGAAAGAGTAACCCGATGGATGACAAATGATGATTTGGTTGTTCTAACTCAAAACTGCAGAAATTTGGTTGAGCTTTCATTGCTAGGGTGTCCTCTTCTTGACCCAGATTCTCTACAGATAATTTCATGTGGATGGCCAGGCTTGGTCTCTATCCATTTAGAGGAATGTGGAGAAGCAACAGCTAATGGGGCTTCTGCTCTTCTTGGCTGCAAAGCTCTTGAAGATATCTTGCTGCGTCACAATGGCCCTGGGCTATACAGAAACTTCATAGGTTATGCTGCTTCAGAGGTTGCACTTTGCTTATATTTATTTATTTTTGGTTCTGTAATGTTGGAAACTTGA 2721 0.398 MEVSHDDDDDHIILLCTNTDPIETTQTLNDEILVSTTDILAWDFPTILTFPTIKVQAHRNRLVEQSLYFRGLLDGSFSESCLGSITINWNVSEFLQILKHMCGCVLDIALDNFFPLYEGALYFGVETLLLKCETWLSEAFSPKGFQSTQIQLEDLIQIWKFGSDLASDFILHLCMGYLARNFMWAKHSNFFGKLPYDLLLSSVKHPHLTVDSELHVSDALLLWLESNLENFERPSKAEDDCNEILKQIRVGLLPLWFALGKRNSLYFKQLAEESLDSIFRLLNIVPMGSLDTFEYRDLHHLRIRLTEYSKRVNLSGCPQITSTILLLSLIPQSCLTDPMQKNIIKQLFINCGHPIRDKCVFTQNLSKTLTFEAVQEVDISKCRYLLIEHAVDCFCKSFPSLRILKAAYLLHIGTISFLQLLETRPMVCEIDLTVDITPVVPALFTVLSSSSAVLPRVPEKPYEEVKIMLFNRFGPPLSNVTKLTLEGRTDVSDLGLRYISKLCGSLRHLNIKGCISVTDIGISDLISTCRKLNSIVTCDTSFGINSVQALCSAIDSSNFPSVHAIGISVVSNLETLHMGGCRGVCESSLLELMSQTQVLKSLCLRGTDLVDQALYNFVGSSLEMLDVSNTKISGAALAYVIHGNPRLKCLKARDCKNLFPGDNCVEKRESSFSSLHEKLHADLGKMCRLEEIEFGWGFSSFSLSALEPALMSLKTINVGLGGMLGEDALKQLPAICPLLETIILHFQVISDIVVINLITSLKNLQELAMCYCFGDISMSSFKFPMQNLTKLRLERVTRWMTNDDLVVLTQNCRNLVELSLLGCPLLDPDSLQIISCGWPGLVSIHLEECGEATANGASALLGCKALEDILLRHNGPGLYRNFIGYAASEVALCLYLFIFGSVMLET 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02496 906 Gene3D - 177 278 - -
Cca03g02496 906 SMART BACK_2 155 263 IPR011705 -
Cca03g02496 906 CDD BTB_POZ_ZBTB_KLHL-like 52 123 - -
Cca03g02496 906 Gene3D Ribonuclease Inhibitor 469 556 IPR032675 -
Cca03g02496 906 SMART LRR_CC_2 570 595 IPR006553 -
Cca03g02496 906 SMART LRR_CC_2 477 502 IPR006553 -
Cca03g02496 906 SMART LRR_CC_2 812 837 IPR006553 -
Cca03g02496 906 SMART LRR_CC_2 761 791 IPR006553 -
Cca03g02496 906 SMART LRR_CC_2 503 528 IPR006553 -
Cca03g02496 906 SUPERFAMILY POZ domain 51 137 IPR011333 -
Cca03g02496 906 Gene3D Ribonuclease Inhibitor 557 883 IPR032675 -
Cca03g02496 906 SUPERFAMILY RNI-like 678 874 - -
Cca03g02496 906 PANTHER UNCHARACTERIZED 60 852 - -
Cca03g02496 906 Pfam BTB And C-terminal Kelch 156 257 IPR011705 -
Cca03g02496 906 Gene3D Potassium Channel Kv1.1; Chain A 46 166 IPR011333 -
Cca03g02496 906 SUPERFAMILY RNI-like 474 718 - -
Cca03g02496 906 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN FBL11 60 852 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02496 - - gmx:100791594 1494.56