Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02487 ATGGAGGAAGAAGCCAATCACCACGCAATAATAGACATGGAAAAAGTAATAGACAGAGAGAGGCTAGCTTCGACGGAGCAAAAGATTTCGGAGAATCCCAAGTTGCTAAGCAAAGCCGCGGGGAAGAAATCATGTTGCATCTTCAGGGTACCCCAAAGCCTGGTCGAGGCTAACGGAAAAGCCTACTTACCTCGTATCGTGTCCATAGGACCATACCACCGTGGCCAACCTCGTCTCAACATGATCGAGGAACACAAGTGGCGTTACCTCGCTTCCCTTCTCTCAAGAACAACACAAACCCAACGTTTGGGCTTAGAGAGTTTATTCAAAGCCATAGCCCCCTTAGAAAGCGAAGCCAGAGAGTGTTACTCCGAAACCATCCACCTCGACTCTCACGACTTCATCGAAATGATGGTCCTCGACGGTTGCTTCATCGTTGAACTCTTCCGCAAAGTCGCCAAATTAGTACCCTTTGAACCCGACGACCCTCTTGTCACCATGGCGTGGATATTACCCTTTTTTTACCGGGATTTTCTCAAACTCGAAAACCAAATCCCTTTCTTCATTCTCAACCAGCTTTTCGAAATAACCAAACTACCCGGAGAAAATTCAACCCTAACACTTTCAACGCTGGCGTTGGTTTTCTTCAACAACTCGTTGCAACGGCCAGACGAAGCCATAGTCTCAAGCGCGAAGGGAAAGCATTTACTCGAATTGGTTCGTTCTTGTTTCATTCCAAGAGAAGAAGAAAGCAAGCCGTTAAAAAGGGTGGTGACGCCGACGCACGTGATCCACTGCGTGTCGAAGCTTCGACGCGCGGGGATTAAGATAACGCCCGGCAACGTTAGCGAGAGTTTCTTGCACGTGACGTTCAGGCGCGGCGTGATTTCGATGCCAACCCTGACGGTGGACGATTTCATGAGCTCGTTTTTGTTGAACTGCGTGGCGTTTGAGCAGTGTTACAGTGGGTTGTCGACGCAGTTCACGGCGTATGTGACTCTCTTGGACTGTCTGATAAACACGTATAGGGACGTGGAGTATTTGTGCGAGCGGAACGTGATTGAGAATCACTTTGGAACGGAGGGTGAAGTGGCGAGCTTCATCAACAACACGGGGAAGGATGTGGCGGTTGATTTGGATTTGTGTTACTTGTCTCACTTGTTCAATGATGTTCATAAGTATTATAGAAATAGTTGGCACGTGCAGTGGGCTAGCTTCAAGTACACCTACTTTGATACGCCCTGGTCCTTTATCTCGGCTCTCGCTGCCTTGTTTTTGTTGATTCTTACCGTGGCTCAGACCTACTTTGCTGCTTATCAGTATTTTGATAATCCTCAAAATTCTTGA 1347 0.4781 MEEEANHHAIIDMEKVIDRERLASTEQKISENPKLLSKAAGKKSCCIFRVPQSLVEANGKAYLPRIVSIGPYHRGQPRLNMIEEHKWRYLASLLSRTTQTQRLGLESLFKAIAPLESEARECYSETIHLDSHDFIEMMVLDGCFIVELFRKVAKLVPFEPDDPLVTMAWILPFFYRDFLKLENQIPFFILNQLFEITKLPGENSTLTLSTLALVFFNNSLQRPDEAIVSSAKGKHLLELVRSCFIPREEESKPLKRVVTPTHVIHCVSKLRRAGIKITPGNVSESFLHVTFRRGVISMPTLTVDDFMSSFLLNCVAFEQCYSGLSTQFTAYVTLLDCLINTYRDVEYLCERNVIENHFGTEGEVASFINNTGKDVAVDLDLCYLSHLFNDVHKYYRNSWHVQWASFKYTYFDTPWSFISALAALFLLILTVAQTYFAAYQYFDNPQNS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02487 448 Pfam Plant protein of unknown function 47 429 IPR004158 -
Cca03g02487 448 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 9 443 IPR004158 -
Cca03g02487 448 PANTHER - 9 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02487 Cca-Chr3 46094605 46096057 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02487 - - gmx:100789486 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02487 03 46094605 46096057 Cca03g02487 03 46094605 46096057 ECH