Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02480 ATGAGAGGCATAGCGTCTTGTTACAACGAACATGCCATTCGCGTGTCCGATTCCTATTGCTCAAGGCCCTCATCAAACCAGGCCTATCTCTGTCCCAAACTGAACCCTTCCACCAGAGATTCAGTTACCTGCATGTACAAACTAACGCAAAAACAACTCTTTGTCACGCTAACTTGGGCCAAGAAACTCTTGGGCCAAGGCTTCAGCATAACCATCTCCAATTCAGAAATTTCTCCGTCCAAATGCAACGCAAGGCAATTGAGAAAGAACAAAGGCAACGAAGCATTCGAATCCCATAGTTTTGAAATTCAAGTTTTGTGGGATCTGTCTGTTGCAAAGTACGAGGAAGGGCCAGAGCCGGTTGGTGGGTTCTACGTGGTCGTTTTGGTGGACTCCGAACTGGGCCTGCGCCTGGGGGACAAAAGCCCAATTGAGGAAGTTCGGGGCTTGGAGGCGAGATTCTGGATGGTTTCGAGGAGCGAAACGTTTTCCGGCAGTGCCGTGTACGCGACAAAGGCGAGATTTTGCGAGACGGGGAATTGTCACGATATATTGATAAAGTGCGGCGCGGAGGAGGGAGGGTCGAAGAGTCACGTGTTGTCCGTGTGCGTGGACAAGAAGACAATGTTCGAGGTAAAGAGGTTACGGTGGAATTTTCGTGGGAACCAGACAATTTTTGTGGATGGTTTGGTGGTGGATATGATGTGGGACTTGCACGATTGGCTTTTCAATTCCAATTCTGCAGCCTCTGCAGTTTTCATGTTCAGGACAAGGAGTGGCCTCGATAGCAGGTTGTGGTTGGAGGAGAAGACCTTGCGTAAGGAACACGACAAAATTGGCTTCTCTTTGTTGATATGTGCCTGTAAGAACCCTGACTGA 879 0.4903 MRGIASCYNEHAIRVSDSYCSRPSSNQAYLCPKLNPSTRDSVTCMYKLTQKQLFVTLTWAKKLLGQGFSITISNSEISPSKCNARQLRKNKGNEAFESHSFEIQVLWDLSVAKYEEGPEPVGGFYVVVLVDSELGLRLGDKSPIEEVRGLEARFWMVSRSETFSGSAVYATKARFCETGNCHDILIKCGAEEGGSKSHVLSVCVDKKTMFEVKRLRWNFRGNQTIFVDGLVVDMMWDLHDWLFNSNSAASAVFMFRTRSGLDSRLWLEEKTLRKEHDKIGFSLLICACKNPD 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02480 292 PANTHER EXPRESSED PROTEIN 1 290 IPR008586 -
Cca03g02480 292 PANTHER FAMILY PROTEIN, PUTATIVE (DUF868)-RELATED 1 290 - -
Cca03g02480 292 Pfam Plant protein of unknown function (DUF868) 38 289 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02480 Cca-Chr3 45991829 45993377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02480 1 290 EF-hand Containing Proteins AT5G28150 36.184 2.00e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02480 - - ccaj:109795697 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02480 03 45991829 45993377 Cca03g02480 03 45991829 45993377 ECH