Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02470 ATGGCCGCATCATCTCTCACATTCTCCAGGCTCATCTTCTCCACCACCGCCTCCCTCTTCGCCCCCAAAACCCTCCCTTCCCGCCTCTCCCTCCGCGCCCCGAGGCCCCTCCGCCTCTCATCCACATCCACCATCTCCGCCGCCCTCTCCGTCGGCGACAAGCTCCCGGAGGCCACCTTCTCCTACCTGGACGCCGAAGGAGAGGTCCAGACCACCACCGTGTCCGACCTCACAAAGGGGAAGAAAGCGGTCCTCTTCGCGGTCCCCGGCGCCTTCACCCCCACGTGCTCGCAGAAGCACGTGCCGGGGTTCGTGGAGAAGTCGGCGGAGCTGAGGGCGAAGGGGGTGGACACCATCGCCTGCATTTCGGTGAACGACGCCTTCGTGATGAGGGCGTGGAAGGAGGATCTCAAGGTAAAGGACGAGGTTTTGCTCTTGTCCGATGGTAACGGAACGTTCACCAAGGCCATTGGGTGCGAACTCGATCTCAGCGACAAGCCAGTGGGCTTGGGGGTTAGGTCTAGGCGCTACGCGCTATTGGCTGAAGATGGCGTCGTCAAGCTCTTCAATTTGGAGGAAGGTGGCGCTTTCACCTTCAGTGGCGCTCAGGATATCATCGATGTCCTTTGA 630 0.6127 MAASSLTFSRLIFSTTASLFAPKTLPSRLSLRAPRPLRLSSTSTISAALSVGDKLPEATFSYLDAEGEVQTTTVSDLTKGKKAVLFAVPGAFTPTCSQKHVPGFVEKSAELRAKGVDTIACISVNDAFVMRAWKEDLKVKDEVLLLSDGNGTFTKAIGCELDLSDKPVGLGVRSRRYALLAEDGVVKLFNLEEGGAFTFSGAQDIIDVL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02470 209 SUPERFAMILY Thioredoxin-like 49 207 IPR036249 -
Cca03g02470 209 ProSiteProfiles Thioredoxin domain profile. 49 209 IPR013766 -
Cca03g02470 209 Gene3D Glutaredoxin 48 209 - -
Cca03g02470 209 PANTHER PEROXIREDOXIN 31 208 IPR037944 -
Cca03g02470 209 PANTHER PEROXIREDOXIN 31 208 - -
Cca03g02470 209 Pfam Redoxin 51 193 IPR013740 GO:0016491
Cca03g02470 209 CDD PRX5_like 51 206 IPR037944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02470 Cca-Chr3 45799535 45800805 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02470 - - ccaj:109797350 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02470 03 45799535 45800805 Cca03g02470 03 45799535 45800805 ECH