Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02448 ATGAAGCTACTCGAAAAAGACTTCACCGTGAACCAAACCGGAAGTGCGAAGATCGTGGCGGAAGAACCCGACGACGTGTGGCTCCTCTACAACCTCATCCTCCCCGGCGACGTGGTCTCCGCCGACACCACCCGTAAAGTCCACCTCGAATCCTCCACCAAGCACGCCGTGTCACGTGTCAAACTCACCCTCCACCTCAAAGTCACGTGCCGCGACTTCCACAAAGACTCCTCCACCCTCCGCCTCCACGGCCGCAACCTCCACCAGAACCACCACGTCGCCGCCGGATCCTTCCACACCCTCACCCTTGAGCCCCACAAGCCCTTCCACCTCCGCAAAAAGCTCTGGGAAAACGACGCCGTCCAAGCCCTAAACGAAACCGCCCAAAAGTCAAACCCTAACAACTCTCCCCCCGACCTCGCCGTCGTCCTCTTCCACCAACACCACGCCGAGATCCACCTCGTCGGACACGGCGCCACCGCTCGCTGCTTCAAAATCGAACCGAGAAAAAAAACCGGACACGGTTCCGGTTCGACCGTGTTCTTCAGGCAAGTTTTCGCTGCGCTCGTGAAGCACGTGGATTTTAACGTTGTCAAGAGCGTGGTTTTATCGAGCGAGGAGTTTCGTAGGTTTGTGTCTTCCGAAGCGAAGAGGTTGAGGAACCGTTGGTTGGAGGAGAACAAAACGCGAATAGTTGTGGTTTCGGGGCACGAGGGTGATTTGGGGAAAGTGTTGGGTGACCCGGCGGTGACGGATTTGGTGAAAGACGTTAAAGTTGGCGCGTTTAGGGAGCTGTGGGAGATGGTTTGCAACGATTCGGGTCGCGCGTGTTATGGACAGGCGGAGGTGGAGCGTGCGCGTGAGGTTAGGGCCATTGAGACGCTATTGATTTGCGATGAGCTTTATAGGAACAACGAGGTTGGGACGAGGAAGAGGTACGAGGGTTTGGTGAAATCCGTGAAAGAGGGTGGCGGAAAGGCTTTGGTGTATTCTTCCATGCATGTTTCCGCGCCCCAACTCTCGCAGCTTACCGGTGTTGCTGCAATTCTCAGGTTTCCCTTGCCTGACCTTGAAGAAGATCCATGA 1086 0.5608 MKLLEKDFTVNQTGSAKIVAEEPDDVWLLYNLILPGDVVSADTTRKVHLESSTKHAVSRVKLTLHLKVTCRDFHKDSSTLRLHGRNLHQNHHVAAGSFHTLTLEPHKPFHLRKKLWENDAVQALNETAQKSNPNNSPPDLAVVLFHQHHAEIHLVGHGATARCFKIEPRKKTGHGSGSTVFFRQVFAALVKHVDFNVVKSVVLSSEEFRRFVSSEAKRLRNRWLEENKTRIVVVSGHEGDLGKVLGDPAVTDLVKDVKVGAFRELWEMVCNDSGRACYGQAEVERAREVRAIETLLICDELYRNNEVGTRKRYEGLVKSVKEGGGKALVYSSMHVSAPQLSQLTGVAAILRFPLPDLEEDP 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02448 361 SUPERFAMILY L30e-like 261 359 IPR029064 -
Cca03g02448 361 SUPERFAMILY Translational machinery components 137 258 - -
Cca03g02448 361 PANTHER PELOTA 1 359 IPR004405 GO:0070481|GO:0070966|GO:0071025
Cca03g02448 361 Pfam eRF1 domain 1 1 127 IPR005140 -
Cca03g02448 361 SMART eRF1_1_2 1 129 IPR005140 -
Cca03g02448 361 SUPERFAMILY Dom34/Pelota N-terminal domain-like 1 127 IPR038069 -
Cca03g02448 361 Gene3D eRF1 domain 2 139 255 IPR042226 -
Cca03g02448 361 Pfam eRF1 domain 3 263 354 IPR005142 -
Cca03g02448 361 PANTHER EUKARYOTIC RELEASE FACTOR 1 (ERF1) FAMILY PROTEIN 1 359 - -
Cca03g02448 361 Gene3D - 256 361 IPR029064 -
Cca03g02448 361 Gene3D Pelota, domain A 1 130 IPR038069 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02448 K06965 - gmx:100803618 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02448 03 45546461 45547546 Cca03g02448 03 45546461 45547546 ECH