Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02439 ATGGCTTTGCCACTTAAGCAACCTCATTTTGTGCTAGTTCCACTTCTGGCTCAAGGCCACATGATCCCCATGATAGACATGGCAAGGATTTTGGCAGAGAGAGGGGTTATTATCACATTGGTAAGTACCCCTCACAATGCCTCAAGATTTGAGCAAACAATCATTAGAGCAGCAAAAGCAGGGCTTCCAATTCAACTCCTACAAATCCCATTTCCATGCCAAAAAGTGGGACTTCCATTAGGCTGCGATAACCTTGATACTTTACCATCTAGAACCCTACTTAGAAACTTCTATATTGCCCTTGACATGATGCATGAACCTTTGGAACAATATCTCCAAAACCATCCTTCTCCACCAAGTTGCATTATATCAGACAAATGCCTCTCTTGGACTTCTATAACAGCCAAGAAGTTCAACATTCCAAGGCTTGTCTTTCATGGCATGTCTTGTTTTTCATTACTTAGCTCCCATAATATCAAGCTCCACAATTCTCATCTTTCATGCTCTTCTGACTCAGAACCTTTTCTCATACCAGGATTGCATCAAAGGATTGAGATAACCAAAGCACAACTCCCTGGAGCTTTTTTTCCTCTGCCTGATTTGGATGATTTTAGACACAAAATTTTAGAGGCTGAAATGTCAGCTTCTGGGGTTGTGGTAAATAGCTTTGAAGAATTGGAGCAAGGGTGTGCTAAAGAGTATGAGAAGGCCTTGAACAAGAGAGTTTGGTGCATTGGTCCTGTGTCCTTATCCAACAAGGATAGTTTGGACAAGTTTGAGAGAGGAAACAAGCCTTCGATTGAAAAGAAGCAATGCTTGGATTGGCTAACCTCAATGGAAACAAGATCAGTTATTTATGTTTGCCTTGGAAGCTTATGTAGGCTTGTTACATCTCAAATGATAGAACTTGGGTTGGGTTTAGAAGCATCAAATCAACCATTTATTTGGGTGGTCAAAACTGCAGGACAAAAATTCTCAAAGCTAAATAATTGGTTAGAGAATGAAAATTTTGATGAAAGGATAAGAGGTAGAGGACTTGTCATAAAGGGATGGGCCCCGCAAACTTTAATATTGTCTCACCCTGCAGTTGGAGGATTCTTGACCCACTGCGGCTGGAATTCAACTATAGAAGGTGTGTGCTCCGGGTTGCCAATGATAACATGGCCTTTATTTGCTGAGCAATTCTTAAATGAAAAATTTATTGTGCAAGTTTTGAAGATTGGAGTTGGAATAGGTGTTGAGGCTCCAGTAAGGTGGGGTGATGAAGAGAAAGTTGGTGCAATGGTGAAGAAAAGGAGAATCATGGAAGCTATAGAGATGTGCATGACGGGAGGTGAAGAGGGCGAAAAAAGGAGGAATAGAGCAATAGAGCTTGGAAAGATGGCAAGAAAGGCCATAGTGGAGGAAGGTTCATCTCACTTCAACATTTCATGCTTAATTGAAGATATTATGAAGCATTAA 1461 0.4093 MALPLKQPHFVLVPLLAQGHMIPMIDMARILAERGVIITLVSTPHNASRFEQTIIRAAKAGLPIQLLQIPFPCQKVGLPLGCDNLDTLPSRTLLRNFYIALDMMHEPLEQYLQNHPSPPSCIISDKCLSWTSITAKKFNIPRLVFHGMSCFSLLSSHNIKLHNSHLSCSSDSEPFLIPGLHQRIEITKAQLPGAFFPLPDLDDFRHKILEAEMSASGVVVNSFEELEQGCAKEYEKALNKRVWCIGPVSLSNKDSLDKFERGNKPSIEKKQCLDWLTSMETRSVIYVCLGSLCRLVTSQMIELGLGLEASNQPFIWVVKTAGQKFSKLNNWLENENFDERIRGRGLVIKGWAPQTLILSHPAVGGFLTHCGWNSTIEGVCSGLPMITWPLFAEQFLNEKFIVQVLKIGVGIGVEAPVRWGDEEKVGAMVKKRRIMEAIEMCMTGGEEGEKRRNRAIELGKMARKAIVEEGSSHFNISCLIEDIMKH 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02439 486 PANTHER GLYCOSYLTRANSFERASE 2 486 - -
Cca03g02439 486 CDD GT1_Gtf-like 8 465 IPR002213 GO:0008194
Cca03g02439 486 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Cca03g02439 486 Gene3D Glycogen Phosphorylase B; 274 467 - -
Cca03g02439 486 Gene3D Glycogen Phosphorylase B; 5 273 - -
Cca03g02439 486 PANTHER PHOSPHATIDYLCHOLINE:DIACYLGLYCEROL CHOLINEPHOSPHOTRANSFERASE 1-RELATED 2 486 - -
Cca03g02439 486 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 275 402 IPR002213 GO:0008194
Cca03g02439 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02439 Cca-Chr3 45449136 45450615 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02439 9 485 Glycosyltransferase AT2G36780 51.255 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02439 - - ccaj:109818058 793.882