Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02436 ATGGATTCAACAACAGCCTTTCGCCACCTCCACTTTGTTTTCATCCCCTTAATGGCCCCAGGTCATCTTCTCCCCATGGTAGACATGGCCAAATTGTTTGCACGACGCAAAGTGAGAGCGAGCATAGTCACCACACCCCTCAATTCAATCCAGTTCCAAGATAGCATAGAAAGAGAGATTCAATCCGGTTCACCAATCCAAATTCTACACGTTCAATTTCCATGCGCTGAGGCTGGACTACCAGAGGGATGTGAGAGCTTGGACACACTCCCTTCAATGGATCTACAGACCAATTTCAACATCGCTATGAACTTGTTGCAGCAGCCACTACAAGATCTACTTGAAAAGCTAAGACCCTTCCCAAGTTGCATAATTGCCGACAAACATTTCTTATGTGTGGCTGATGTTGCTGACAAGTTGAACGTCCCTAGAATAATATTCGATGGGACTAACTGTTTCTTTCTGCTATGCAACCACAATTTGGACAAGTATAAGGTGCATGAAGCTGTGTCTGGTGAAGAGAAATTTCTTGTCCCTGGAATGCCCCACAGGATTGAGTTATGCAGATCTCAACTCCCCGGGATATTCAATCCTGGCACAAAACTCAAGTTGCAAGCTTATCGCGAGAAGGTGAGGGAAGTTTCAAAAAGAGCATATGGGATAGTGGTTAATAGTTTTGAAGAGTTGGAAGTTGAATATGTTAAAGAGTATCAAAGGGTTACGGGTCATAAGGTGTGGTGTGTTGGACCTGTGTCACTTTCCAATAAGGATGACATGGACAAGGCTTTGAGAAGTAAGAGAAACTCAAGTGATGAAGTTGAGTATTTGATGAAGTGGCTTGATTCATGGCCTCCAAGGTCTGTGATTTATGTTTGCCTTGGTAGCTTAAACCGTGCAACGCCTGAGCAGTTGATAGAGCTAGGGTTAGGGTTGGAAGCAACAAAAAGGCCATTCATTTGGGTGCTGAGAGGTGCATATGGAAGAGAGGAAATGGAGAAGTGGTTATTGGAAGAAGGGTTTGAGGAGAGGGTGAAAGAGAGAGGGGTTGTGATGAATGGTTGGGTGCCACAAGTGTTGATATTGTCACATGGAGCAATAGGAGCGTTTTTGACTCATTGTGGATGGAATTCCACACTTGAAGGGATTTGTGGTGGGGTACCTTTGGTGACTTTTCCTCTGTTTGCTGAGCAGTTCTATAATGAGAAGGTTGTTGCACAAGTGGTGGAGATTGGGGTGAGTGTGGGAGCTGAATCCGTTGTGCACTTGGGAGAGGAATATAATTCTCGGGTTCAGGTTACGAGGGAAAATTTTAAGGATTCTATTGAGAAGGTGATGGGTGAGGGCAGAGAAAAAGAAGAGATAAGGGAAAGGGCTAGAAAGTATGGGAACATGGCAAAAAAAGCAATAGAACAATGTGGGTCTTCTTACCTCAATATGTCCAAATTAATTCATGACATCGTACGTGTCAAAGGGTTAGACCAAAGCTAA 1488 0.4402 MDSTTAFRHLHFVFIPLMAPGHLLPMVDMAKLFARRKVRASIVTTPLNSIQFQDSIEREIQSGSPIQILHVQFPCAEAGLPEGCESLDTLPSMDLQTNFNIAMNLLQQPLQDLLEKLRPFPSCIIADKHFLCVADVADKLNVPRIIFDGTNCFFLLCNHNLDKYKVHEAVSGEEKFLVPGMPHRIELCRSQLPGIFNPGTKLKLQAYREKVREVSKRAYGIVVNSFEELEVEYVKEYQRVTGHKVWCVGPVSLSNKDDMDKALRSKRNSSDEVEYLMKWLDSWPPRSVIYVCLGSLNRATPEQLIELGLGLEATKRPFIWVLRGAYGREEMEKWLLEEGFEERVKERGVVMNGWVPQVLILSHGAIGAFLTHCGWNSTLEGICGGVPLVTFPLFAEQFYNEKVVAQVVEIGVSVGAESVVHLGEEYNSRVQVTRENFKDSIEKVMGEGREKEEIRERARKYGNMAKKAIEQCGSSYLNMSKLIHDIVRVKGLDQS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02436 495 Coils Coil 451 471 - -
Cca03g02436 495 Gene3D Glycogen Phosphorylase B; 278 470 - -
Cca03g02436 495 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 492 - -
Cca03g02436 495 Gene3D Glycogen Phosphorylase B; 8 277 - -
Cca03g02436 495 CDD GT1_Gtf-like 10 465 IPR002213 GO:0008194
Cca03g02436 495 ProSitePatterns UDP-glycosyltransferases signature. 354 397 IPR035595 -
Cca03g02436 495 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 280 407 IPR002213 GO:0008194
Cca03g02436 495 PANTHER GLYCOSYLTRANSFERASE 8 491 - -
Cca03g02436 495 PANTHER GLYCOSYLTRANSFERASE 8 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02436 Cca-Chr3 45423572 45425374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02436 10 489 Glycosyltransferase AT2G36780 47.718 6.85e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02436 K13496 - gmx:100820150 818.15