Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02432 ATGGCACCCCAAGAACAGCAACTCCACTTTGTCTTGTTTCCATTGATGGCTCAAGGCCACATGATACCCATGATGGACATTGCTAAAATATTGCTGCACCGCAATGTTATTGTGACAGTAGTCACAACGCCACATAATGCAACTCGTTTCACTTCAATTGTTGATCGTTATATTGAATCTGGTTTTCAAATCAGATTAGCTCAACTTCAATTCCCATGCAAAGAAGGTGGAGTACCAGATGGATGCGAGAATCTCGATATGATACCTTCACTTGGCATGGCCTCCAGTTTCATCAATGCAGCAAGCTTTCTACAACAACCAGCGGAAAAACTTTTTGAAGAGTTAACACCGCCACCAAGCTGCATAATCTCTGATATGTGTTTACCATATACAAACCATATTGCTAGAAAATTTAATATTCCCCGGATTTCTTTTGTCGGAGTAAGTTGCTTCTATCTCTTATGCATGTATAATATACGCTTACATAATGTAGTGGAGAGCATAACTACTGAATCGGAGTACTTTGATGTACCTGATATCCCTGACAAAATTGAAGTGACCATAGCTCAGACAGGACTACCAATGAATCAAAGCACTACGAGACATATTAGAGAGGCAATGTTAGAAGCTGAAATGGAAGCATATGGAATGATCATGAATTCTTTTGAAGAGTTGGAACCAGCATATGCAGAGGGACTCAAGAAGATGAGAAACAATAAAGTTTGGTGTTTCGGACCACTATCGTCATATAGTAACAAGGATGCTTTGGATAAGACTCAAAGAGGTAAAAGGGCCTCAATTGACGAGAACCACCTGAAGTGCTGGCTTGATAGTCAAAAGCCAGAGACTGTCATATATGCATGCTTTGGAAGCCTATGCAATTTAATACCTCAACAGTTGATAGAACTTGGTTTAGCCTTAGAAGCATCAGAAAGACCCTTCATTTGGGTTATCAGGGAAGGAAGTCAATCAGAAGCATTGGAAAAATGGATCAAGGAAGATGAATTTGAGGAAAGGACCAATGGTAGAAGCCTTCTGATTCGGGGTTGGGCTCCTCAGTTGTTAATATTATCTCACCCTGCTATTGGAGGCTTCATAACACACTGTGGTTGGAACTCTACCTTAGAAGCAATATGTGCTGGAGTGCCAATGTTGACGTGGCCACTGTTTGCTGATCAGTTTTTGAATGAAAGTCTAGTTGTTGAAGTGTTAAAAGTAGGAGTAAAGATTGGGGTGGAGAGTCCTGTTACATGGGGCAAAGAAGAGGAAATTGGTGTGCTGGTGAAGAAGGAAAATGTTGAAAAGGCAATAGTAAAGTTAATGGATGGGACTAGCGAAAGTGAAGAAAGAAGAAAAAGGGTAAGAGAGCTTGCAGAGAAGGCTAAAACAGCTGTAGAGAAAGGGGGATCCTCTCATTTAAATGTGACCTTATTTATTCAATACATCATGCAAAAAatcaagagatcagatgtctga 1476 0.3984 MAPQEQQLHFVLFPLMAQGHMIPMMDIAKILLHRNVIVTVVTTPHNATRFTSIVDRYIESGFQIRLAQLQFPCKEGGVPDGCENLDMIPSLGMASSFINAASFLQQPAEKLFEELTPPPSCIISDMCLPYTNHIARKFNIPRISFVGVSCFYLLCMYNIRLHNVVESITTESEYFDVPDIPDKIEVTIAQTGLPMNQSTTRHIREAMLEAEMEAYGMIMNSFEELEPAYAEGLKKMRNNKVWCFGPLSSYSNKDALDKTQRGKRASIDENHLKCWLDSQKPETVIYACFGSLCNLIPQQLIELGLALEASERPFIWVIREGSQSEALEKWIKEDEFEERTNGRSLLIRGWAPQLLILSHPAIGGFITHCGWNSTLEAICAGVPMLTWPLFADQFLNESLVVEVLKVGVKIGVESPVTWGKEEEIGVLVKKENVEKAIVKLMDGTSESEERRKRVRELAEKAKTAVEKGGSSHLNVTLFIQYIMQKIKRSDV 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02432 491 Gene3D Glycogen Phosphorylase B; 272 466 - -
Cca03g02432 491 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 484 - -
Cca03g02432 491 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 485 - -
Cca03g02432 491 Gene3D Glycogen Phosphorylase B; 1 271 - -
Cca03g02432 491 CDD GT1_Gtf-like 8 478 IPR002213 GO:0008194
Cca03g02432 491 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 278 401 IPR002213 GO:0008194
Cca03g02432 491 ProSitePatterns UDP-glycosyltransferases signature. 350 393 IPR035595 -
Cca03g02432 491 PANTHER GLYCOSYLTRANSFERASE 7 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02432 Cca-Chr3 45393536 45395011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02432 8 487 Glycosyltransferase AT2G36760 53.527 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02432 K13496 - gmx:100780411 809.29