Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02431 ATGGCTCCCCAAGAACAGCAACTCCACTTTGTCTTGTTTCCATTGATGGCCCAAGGCCACATGATACCTATGATGGACATTGCTAAAATATTGCTGCACCGCAATGTTATTGTCACTGTAGTCACAACACCACAAAATGCATCTCGTTTCACCTCAATCTTTGATCGTTATATTGAATCTGGTTTTCAAATCAGATTAGCTCAACTTCAATTCCCATGCAAAGAAGGTGGAGCCCCAGATGGATGCGAGAATCTTGATATGATCCCTTCACTTGGCATGGCCGCGACTTTCTTCAATGCAACAAACTTTCTACGACAACCAGCGGAAAAACTATTTGAAGAGTTAACACCACCACCAAGCTGCATAATCTCTGATATGTGTTTAACATACACAAACCACATTGCTAAAAAATTTAATATCCCCAGGATTTCTTTTGTTGGAGTAAGTTGCTTCTATCTCTTTTGCATGTCTAATATACGCATCCATAATGTTGCGGAGAGCATAGCTACTGAATCCGAGCACTTTCTTGTGCCTGGAATACCTGACAAAATTGAAATGACCATAGCAAAGACAGGACTATCAATGAATGAAAGCATGAAACAGGTTACTGATAGAGTGTTTGCAGCTGAAATGGAATCTTATGGGATGATCATGAATTCTTTTGAAGAGTTGGAGGCAGCATATGCAGAGGGATACAAGAAGATGAGAAACGATAAAGTGTGGTGTTTCGGACCACTATCATATAGTAACAAGGAACACTTGGATAAGGCTCAAAGAGGTAAAAAGGCCACCATTGACGAGTGCCACTTGAAATGCTGGCTTGAATGTCAAAAACTAGGGTCTGTCATGTATGCATGCTTTGGAAGCCTATGTAATTTAATACCTCAACAGTTGATAGAGCTTGGTTTAGGCTTAGAAGCATCAGAAAGACCCTTCATTTGGGTTATCAGGGACGGAAGTCAATCAGAAGCATTGGAAAAATGGATCAAGGAAGATGGATTTGAGGAAAGGACCAATGGTAGAAGCCTTCTGATTCGGGGTTGGGCTCCTCAGTTGTTAATATTATCTCACCCTGCTATTGGAGGCTTTATAACACACTGTGGTTGGAACTCTACCTTAGAAGCAATATGTGCTGGGGTGCCAATGGTGACGTGGCCACTGTTTGCTGATCAGTTTTTGAATGAAAGTCTAGTTGTTGAAATATTAAAAGTTGGAGTAAAGGTTGGGGTGGAGAATCCTGTTACATGGGGAGAAGAAGAGGAAGTTGGTGTGCTGGTGAAGAAGGAAGATGTTGAAAAGGCAATTGGGAAGTTAATGGATGAGACAAATGAAAGTGAAGAAATAAGAAAAAGGGTAAGAGAGCTTGCTGAGAAGGCTAAGAGAGCTGTAGAGAAAGGGGGATCCTCTCATTTTAATGTCACCTTGCTGATCCAGGATATCATGCAAAAGATCAAGAGAGAGGTGTGA 1467 0.4131 MAPQEQQLHFVLFPLMAQGHMIPMMDIAKILLHRNVIVTVVTTPQNASRFTSIFDRYIESGFQIRLAQLQFPCKEGGAPDGCENLDMIPSLGMAATFFNATNFLRQPAEKLFEELTPPPSCIISDMCLTYTNHIAKKFNIPRISFVGVSCFYLFCMSNIRIHNVAESIATESEHFLVPGIPDKIEMTIAKTGLSMNESMKQVTDRVFAAEMESYGMIMNSFEELEAAYAEGYKKMRNDKVWCFGPLSYSNKEHLDKAQRGKKATIDECHLKCWLECQKLGSVMYACFGSLCNLIPQQLIELGLGLEASERPFIWVIRDGSQSEALEKWIKEDGFEERTNGRSLLIRGWAPQLLILSHPAIGGFITHCGWNSTLEAICAGVPMVTWPLFADQFLNESLVVEILKVGVKVGVENPVTWGEEEEVGVLVKKEDVEKAIGKLMDETNESEEIRKRVRELAEKAKRAVEKGGSSHFNVTLLIQDIMQKIKREV 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02431 488 Gene3D Glycogen Phosphorylase B; 3 267 - -
Cca03g02431 488 Gene3D Glycogen Phosphorylase B; 269 464 - -
Cca03g02431 488 Coils Coil 438 465 - -
Cca03g02431 488 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 7 483 - -
Cca03g02431 488 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 482 - -
Cca03g02431 488 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
Cca03g02431 488 CDD GT1_Gtf-like 8 462 IPR002213 GO:0008194
Cca03g02431 488 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 282 398 IPR002213 GO:0008194
Cca03g02431 488 PANTHER GLYCOSYLTRANSFERASE 7 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02431 Cca-Chr3 45385918 45387384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02431 8 485 Glycosyltransferase AT2G36760 54.886 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02431 K13496 K22771 gmx:100780411 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02431 03 45385918 45387384 Cca03g02431 03 45385918 45387384 ECH