Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02428 ATGACCACTCACCAATGCATAAATAAACAAGATGATGAGAATTGGTTGTACCTCATCATTTCAGTGCAAGAAAATATGGCTTCCGAAGCACACAAGCCACACTTCGTCTTGTTCCCATTGATGGCTCCAGGCCACATGAATCCCATGATGGACATCGCAAAAATATTGGTCCACAGCAATGTTATTGTGACAGTAGTCACAACACCTCACAATGCAGCACGTTTCACATCAGTCTTTGATCGTTATTTCGAATCTGGGTTTCGAATCAGATTAGCTCAACTAGAATTCCCATGCAAAGAAGGTGGAGTACCTGATGGATGCGAGAATCTCGATATGATACCTTCACTTGGCATGGCCGCGGCTTTCTTCAAAGCAACAACCCTTCTGCAGCAACCAGCTGAAAAACTCTTCGAAGAGTTAACACCACCACCATGCTGCATAATATCTGATATGTGTTTACCATACACAATTCACATCGCCAAAAGACACAACATTCCCAGGATCTCTTTTGTTGGAGCAAGTTGCTTTTGTCTTTTATGTCTGCATAATATACGCATCTATAATGTTGAGGATAGCTTAACTTCCGAGTCGGAGTACTTTGTTTTGCCTGGTATCCCTGACAAGATTGAAATGACCATAGCACAGGCAGCACAACCGATCAATGAAACATGGAAAAAGTTTCGTAGTGAAATTATGGCAGCAGAAATGGCTAGTTATGGGATAATCATGAATTCTTTTGAAGAGTTGGAGCCAGCATATGCAAGGGACTACAAGAAGGTTAGAGGAGAAAAAGTGTGGTGTATAGGTCCTGTGTCACTTGTTAACAAGGATCACTTGGATAAGGCTCAAAGAGGAAGGGGTTCAATTGATGTGTCACCACACGTTAAATGGCTTGATTGTCAGAAGCCAGGGAGCGTAATCTATGCATGCCTTGGAAGCCTTTGCAATTTAACGCCACCACAATTGATAGAGCTTGGTTTAGCCTTAGAAGCATCAGAAAGACCCTTTATTTGGGTCATCAGGGAAGGAAGTCATTCAGAAGGGTTGGAAAAGTGGATTAATGAATATGGATTTGAGGAAAGGACCAATGGTAGAAGCCTTCTGATTCGAGGTTGGGCTCCTCAGTTGTTAATATTATCTCACCCTGCTATTGGAGGCTTCATAACACACTGTGGTTGGAACTCTACCTTAGAAGCTATTTGTTCTGGGGTTCCAATGGTGACGTGGCCACTATTTGCGGATCAGTTTTTGAATGAAAGTCTAGTGGTGCATGTACTAAAAGTTGGAGTAACGGTTGGGGCGAAAAGTCCTGTTACATGGGGCAAGGAAGAGGAAATTGGTGTGATGGTAAAGAAGGAAGATGTTGAAAGGGCAATAATGGAGTTGATGGATGAGACAAGCGAGAGTGAAGAAAGAAGAAAAAGGGTAAGAGAGTTTGCAGATAAGGCTAAAAGAGCCGTAGAGAAAGGGGGATCCTCTCATTCTAATGTGAACTTGCTTATCCAGGATATCATGAAGAAAAATCATGACTAA 1533 0.4234 MTTHQCINKQDDENWLYLIISVQENMASEAHKPHFVLFPLMAPGHMNPMMDIAKILVHSNVIVTVVTTPHNAARFTSVFDRYFESGFRIRLAQLEFPCKEGGVPDGCENLDMIPSLGMAAAFFKATTLLQQPAEKLFEELTPPPCCIISDMCLPYTIHIAKRHNIPRISFVGASCFCLLCLHNIRIYNVEDSLTSESEYFVLPGIPDKIEMTIAQAAQPINETWKKFRSEIMAAEMASYGIIMNSFEELEPAYARDYKKVRGEKVWCIGPVSLVNKDHLDKAQRGRGSIDVSPHVKWLDCQKPGSVIYACLGSLCNLTPPQLIELGLALEASERPFIWVIREGSHSEGLEKWINEYGFEERTNGRSLLIRGWAPQLLILSHPAIGGFITHCGWNSTLEAICSGVPMVTWPLFADQFLNESLVVHVLKVGVTVGAKSPVTWGKEEEIGVMVKKEDVERAIMELMDETSESEERRKRVREFADKAKRAVEKGGSSHSNVNLLIQDIMKKNHD 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02428 510 Gene3D Glycogen Phosphorylase B; 294 488 - -
Cca03g02428 510 Gene3D Glycogen Phosphorylase B; 30 292 - -
Cca03g02428 510 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 306 425 IPR002213 GO:0008194
Cca03g02428 510 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 32 506 - -
Cca03g02428 510 Coils Coil 452 472 - -
Cca03g02428 510 PANTHER UDP-GLYCOSYLTRANSFERASE 73C5-RELATED 32 508 - -
Cca03g02428 510 PANTHER GLYCOSYLTRANSFERASE 32 508 - -
Cca03g02428 510 ProSitePatterns UDP-glycosyltransferases signature. 372 415 IPR035595 -
Cca03g02428 510 CDD GT1_Gtf-like 33 496 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02428 Cca-Chr3 45374792 45376768 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02428 34 507 Glycosyltransferase AT2G36760 55.439 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02428 K13496 K22771 gmx:100527132 808.135