Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02427 ATGTCTCGCACATTTCCAAGAATTGGCAAAACTCGTGAAAGTACACCTTTCCAACGTGCATCCGGCCTTCAAATTCGGTTAGTACTATTTCATTTTCCATCAAAAGAAGCAGGACTACCTGAAGGGTGTGAAAACCTCGACATGGTAGCTTCGAGCGATATGATCTACAAAATCTTCCTAGCCATCAGCTTGCTCCAGAAGCCTGCAGAAGAATTGTTTCAACAGCTAACACCCAAGCCAAGTTGCATAATCTCTGATTTTTGCATTCCTTGGACTGCTCAAGTAGCTGAGAAGTTTCATATTCCAAGGATTTCATTCCACGGTTTTTCTTGCTTCTGCCTCCATTGTCGACACATGATACACACTTCAAAGGTTTCGGAAGGCCTCACTTCAGAATCCGGGCACTTCATTATACCTGGCATACCTGACCAAATTCAAGTTACTAAAGATCAATTACCTGGAACGGTCACAAGTTTCAATGAAGAGATGAATGACTACATGGAGCGAATTCGTGATGCTGAAATGAAGTCATATGGGGTAATCATAAATACGTTTGAAGAGTTGGAGAAGGCATATGTGAGGGATTACAAGAAGGTGAAAAATGATAAGGTGTGGTGCATTGGTCCTGTTTCATTCTGTAACAAAGAAGGCTTAGATAAGGCTCAAAGAGGCAACCATGCCTCGATTAATGAGCACCATTGCTTCAAGTGGCTAGATTTGCGTCAATCCAAGTCTGTGCTCTATGTTTGTTTTGGAAGCTTGTGTAATTTGATTCCTTCGCAGCTTGTGGAGCTGGCCTTGGCCTTGGAGGACACTAAAAGACCATTTGTATGGGTTATTAGGGAGGGAAGTAAGTTCCAAGAGTTGGAAAAGTGGATCATGGAAGAAGGGTTTGAGGAAAGGACCAAAGGGAGAGGCCTTATAATTCGAGGTTGGGCTCCACAAGTACTAATATTATCACACCCTGCCATTGGAGGATTCTTAACACACTGTGGCTGGAATTCAACACTTGAAGGAATAAGTGCTGGCGTGCCATTGATTACTTGGCCTTTATTTGGTGACCAATTTTTAAATGAGAAGCTCATTACTCAAGTGTTGAAGATTGGTGTGAGCGTTGGGGTAGAGATTCCAATGAAGTGGGGAGAGGAAGAGAAAGTAGGTTTGCAGGTGAAAAAGGAAGATATTAAGAAGACAATATGCATGGTGATGGATGATGATAATGAAGAAAGTAGAGAGAGAAGAGAAAGGGCAGGCAAACTCAGTGAGATGGCAAAGAGAGCCGTTGAAAAAGATGGTTCTTCTCATCTTGATATGACTTTGCTTATCCAAGACATTATGCAACAATCATGTAATGGTGAGGAGGATATGAAGCTGACGCCTAAAGACTCGTAA 1392 0.4224 MSRTFPRIGKTRESTPFQRASGLQIRLVLFHFPSKEAGLPEGCENLDMVASSDMIYKIFLAISLLQKPAEELFQQLTPKPSCIISDFCIPWTAQVAEKFHIPRISFHGFSCFCLHCRHMIHTSKVSEGLTSESGHFIIPGIPDQIQVTKDQLPGTVTSFNEEMNDYMERIRDAEMKSYGVIINTFEELEKAYVRDYKKVKNDKVWCIGPVSFCNKEGLDKAQRGNHASINEHHCFKWLDLRQSKSVLYVCFGSLCNLIPSQLVELALALEDTKRPFVWVIREGSKFQELEKWIMEEGFEERTKGRGLIIRGWAPQVLILSHPAIGGFLTHCGWNSTLEGISAGVPLITWPLFGDQFLNEKLITQVLKIGVSVGVEIPMKWGEEEKVGLQVKKEDIKKTICMVMDDDNEESRERRERAGKLSEMAKRAVEKDGSSHLDMTLLIQDIMQQSCNGEEDMKLTPKDS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02427 463 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 447 - -
Cca03g02427 463 PANTHER GLYCOSYLTRANSFERASE 20 454 - -
Cca03g02427 463 ProSitePatterns UDP-glycosyltransferases signature. 312 355 IPR035595 -
Cca03g02427 463 Gene3D Glycogen Phosphorylase B; 39 438 - -
Cca03g02427 463 Coils Coil 156 176 - -
Cca03g02427 463 Gene3D Glycogen Phosphorylase B; 224 426 - -
Cca03g02427 463 PANTHER GLYCOSYLTRANSFERASE 20 454 - -
Cca03g02427 463 CDD GT1_Gtf-like 19 430 IPR002213 GO:0008194
Cca03g02427 463 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 226 364 IPR002213 GO:0008194
Cca03g02427 463 MobiDBLite consensus disorder prediction 406 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02427 Cca-Chr3 45368480 45369871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca03g02427 21 448 Glycosyltransferase AT2G36760 55.478 2.33e-179 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02427 K13496 K22771 gmx:100802029 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02427 03 45368480 45369871 Cca03g02427 03 45368480 45369871 ECH