Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02421 ATGATGGAAGAAATTTTTCTTCATTTATCTGGGACAAATTCAGCATTACAGGCTATGGTTCAAATCCTTGCAGAATTTGCTTCTACTGATCCCTTGCAGTTTATTCCACGTTGGAAAGGTGTACTTTCACGAGTTTTGCCAATTCTTGGAAATGTGCGAGACATGCACCGACCAATTTTTGCAAATGCATTTAAGTGTTGGTGTCAAGCTGCTTGGCAATATAGTATAGATTTTCCTTCACATTTTCCCCAAGATGGCGATGTCATGTCATTTCTAAATTCTGCTTTTGAACTTTTGTTGAGAGTTTGGGCAGCTTCGAGAGACCTAAAGGTTCGTGTGGCATCTGTAGAAGCACTTGGGCAGATGGTGGGTCTCATAACACGAACACAATTAAAGACCGCCCTACCAAGGCTTATTCCTACAATATTGGATTTGTATAAAAAGGATCAAGATATAGCTTTTCTGGCTACAAGTAGTCTCCACAATCTGTTAAATGCCTCTTTACTGTCAGAAAGTGGCCCTCCTATGCTTGATTTTGAGGATTTGACTCTTATTTTATCAACACTTCTACCTGTGGTTTCTATCAATAATGACAGCAAAGACCAATCAGATTTCTCTGTGGGACTAAAGATGTATAATGAGGTTCAGCATTGCTTTCTGACAGTTGGCTTGGTGTATCCAGATGATTTGTTTTTGTTCCTTGTAAATAAATGCAGGTTGAGGGAAGAGCCATCAACTTTTGGTGCACTTTGCATTTTGAAGCATCTTTTGCCAAGGCTATCTGAAGCTTGGCATAGTAAAATACCTCTACTAGTCGAAGCTGTAAAGTCCTTGCTTGAGGAGCAGAATTTAGGTGTTCGGAAGGCACTTTCTGAGTTAATTGTGGTTATGGCTTCTCACTGTTACTTGGTTGGTTCGTCTGGAGAGTTGTTCATTGAATATCTTGTACGGCATTGCGCTATAACAGAGCAAAATCGGAGTGATCTTGAGAGCACACCAAATAAGAGAATAGAGATGAAGATTGGAGCAGTTACTCCTAGTGAGTTAAGAGCAGTTTGTGAGAAAGGTCTCCTTTTGGTCACTATTACGATTCCTGAAATGGAGCATATTCTTTGGCCTTTTCTGTTGAAGATGATTATTCCGCGGACCTATGCTGGTGCTGTGGCGACGGTGTGCAGGTGTATCTCAGAATTGTGGCGGCATAGGTCATATAACAATGATATGTTGAGTGAGTGTAAAACCCGTTCTGATATACCAACTGCTGAGGAACTTCTTGCCCGTTTGGTGGTGCTTTTACATGATCCTCTAGCAAGGGAGCAATTGGCCACCCAAATTTTGACAGTTCTATGTCTTCTGGCACCTCTATTTCCAAAAAATATCAATTTGTTTTGGCAAGATGAGATTCCAAAGATGAAGGCTTATGTTAGTGATACAGAAGACTTGAAACAGGATCCATCATATCAAGACACTTGGGATGACATGATAATCAATTTTCTTGCAGAGTCTTTGGATGTGATCCAAGATGCAGATTGGGTTATGTCTCTAGGAAATGTTTTTGCCAAACATTATGAACTTTATGCATCTGATGATCAACACACTGCACTTCTTCACCGGTGCTTGGGGATTCTGCTTCAAAAGGTAAATGACAGAGCTTATGTCCATGACAAAATAGATTGGATGTATAAGCAAGCAAACATTGCAATTCCAACAAATAGACTTGGGTTGGCAAAAGCAATGGGATTGGTTGCTGCATCCCACTTGGATACAGTGTTGGAGAAGCTGAAGGATATTTTAGACAATGTTGGACAAAGCATATTTCAGAGGATACTGTCATTGTTCTCTGATAGTTTCAGAACAGAAGAGTCTGATGACATACATGCTGCTTTGGCGCTAATGTATGGATATGCTGCAAAATATGCCCCGTCAACAGTTATTGAAGCCCGAATAAATGCTCTTGTTGGAACCAATATGCTCTCTCGGCTTCTTCATGTGCGTCACCCCAGAGCAAAACAAGCTGTCATCACAGCAATTGATTTACTAGGTAATGCTGTCATTAATGCTGCTGAAAGTGGTTCACCATTTCCACTGAAAAGAAGGGACCAACTGCTTGATTATATTTTGACATTGATGGGACGAGATGATGAAGATGGTTTTGCTGATTACAATGAACTTTTGCGTACTCAGGCCCTTGCTATAAGTGCGTGCACTACATTAGTCTCTGTGGAACCAAAACTAACAGTTGAAACTAGAAACCATGTTATGAAGGCCACATTGGGGTTCTTTGCTATACCAAATGATCCAGTTGATGTTGTCAATCCCCTTATAGACAACTTGATTACTCTTTTATGTGCAATTCTTCTCACTGGTGGAGAGGATGGAAGAAGTCGAGCAGAGCTGCTAATGCTTATCTTGAGGCAAATCGATCAATTTGTCTGTTCTCCTGTTGAGTATCAGAGGAAAAGAGGCTGTCTTGCTGTCCATGAGATGCTTCTAAAGTTTCGGATGATTTGTGTTAGTGGGTATTGTGCACTGGGCTGCCATGGGAGTTGTACACATAACAAGCAAATTGACCATACTCTATATGGGAGTTTTTCAAAGCTACCATCTGCATTTGTATTGCCAAGTCGAGAAGCTTTGTGCTTGGGAGATAGGGTAATAATGTATCTTCCACGTTGTGCAGACACAAATTCTGAAGTCAGAAAAACATCAGCGCAAATTCTTGATCTACTCTTCAGCATCTCTCTTTCACTTCCAAGACCTGCAGGTTCGTCTATATCTGCTGAAGAGATAGAATTGTCATACAGTGCATTATCGTCTCTTGAGGATGTTATAGCTATATTGAGGAATGATACTTCTATTGATCCATCAGAAGTTTTCAACAGGATTGTTTCCTCCCTCTGTATTCTGTTGACAAAAGATGAGCTGGTTGCTACACTGCATGGTTGCTCAGTGGCTATATGTGATAAGATCAAGCAGTCAGCTGAAGGGGCTATTCAGGCTGTTGTTGAATTTGTTACAAAGAGAGGGAGAGAACTGACTGATATTGATATCTCAAGGACAACCCAAGCACTGATCTCTGCCACTGTACATGCAACTGATAAGCATTTGCGTGTGGAAACTCTTGGAGCTATTTCTTCTTTGGCTGAAAACACTAGCCCAAAAACTGTTTTTGATGAAGTCCTGGCTACTGCTGGAAGGGATACAATCACAAAAGATATATCTAGGTTACGCGGAGGATGGCCAATGCAGGATGCATTCTATGCATTTTCTCAGCACATGGTACTGTCAGTTTTGTTTCTAGAACATGTGATATCTGTCCTTAGCCAGATTCCCATCCTTAAGGGTGATGTGGACAGAGTTGAGGATAGCCAGGTTGAAAGTCATACAGAAGATGGCAAACTGCAGGCTGCAATTTTTGCTCTTACTGCTTTCTTCAGAGGTGGGGGAAAAGTTGGAAAAAGGGCTGTTGAACAAAACTATGCTTCTGTTCTGTCTGAGCTTACACTGCAACTTGGAAGCTGTCATGGTTTAACATACTCTGGTCAGCACGAACCATTGAGGAATCTTCTTATAGCATTTCAGGCATTCTGTGAATGTGTTGGTGACCTTGAGATGGGCAAGATTTTAGCTAGAGATGGAGAACTATCAGAAAATGAGAGGTGGATTAGTCTCATAGGAGACATAGCAGGCTGCATATCTATAAAGCGACCAAAAGAGGTACAAAATATTTGTCTATTTTTTAAAAATTCATTGGATCGACCCCAAAAATACCAAAGGGAAGCTGCAGCTGCTGCATTGTCAGAATTTGTTCGATATAGCGGTGGACTTGGATCACTTTTGGAGCAAATGGTTGAGGTTTTATGTCGGCATGTATCAGATGAATCTTCAACTGTTCGGCGATTATGTTTGCGAGGATTAGTACAGATCCCAATGATTCATATTCTGAAGTATACAACTCAAGTCTTGGGCGTTATATTAGCTCTGCTAGATGATTCTGATGAATCTGTACAATTAACTGCTGTATCATGCTTACTGATGATTCTTGAATCTTCACCTGATGATGCAGTTGAGCCCATTTTGCTTAATCTTTCAAAACGACTTCGAAATCTTCAGACAAGCATGAATGCAAGGATGCGAGCCAGTTCTTTTGCAGTATTTGGAGCTCTAAGCAACTATGGAATTGGGGCACTAAAGGAGGCATTTGTTGAGCAGGTCCATGCTGCTGTTCCTCGCCTTGTCTTGCATCTTCATGATGAAGATTTTAGTGTCCGATTAGCCTGCCGGAATACCCTGAAAAGAGTTTGCCCATTGATGGAAATTGAAGGATTGCTTGCCCTACTAAACACACAGACTTTCCTTTCTGATCATCGGAGTGACTATGAGGACTTGCTCCGAGACATAGCAAAGCAATTTACTCAGCATCTTGCATCCAGAGTTGATAGTTATATGGCATCAACAGTGCAGGTTCTTTTTCACACTTTTTGTTATAACACAATAATTAGTCATGATATTTTTTCTAACTGA 4524 0.4089 MMEEIFLHLSGTNSALQAMVQILAEFASTDPLQFIPRWKGVLSRVLPILGNVRDMHRPIFANAFKCWCQAAWQYSIDFPSHFPQDGDVMSFLNSAFELLLRVWAASRDLKVRVASVEALGQMVGLITRTQLKTALPRLIPTILDLYKKDQDIAFLATSSLHNLLNASLLSESGPPMLDFEDLTLILSTLLPVVSINNDSKDQSDFSVGLKMYNEVQHCFLTVGLVYPDDLFLFLVNKCRLREEPSTFGALCILKHLLPRLSEAWHSKIPLLVEAVKSLLEEQNLGVRKALSELIVVMASHCYLVGSSGELFIEYLVRHCAITEQNRSDLESTPNKRIEMKIGAVTPSELRAVCEKGLLLVTITIPEMEHILWPFLLKMIIPRTYAGAVATVCRCISELWRHRSYNNDMLSECKTRSDIPTAEELLARLVVLLHDPLAREQLATQILTVLCLLAPLFPKNINLFWQDEIPKMKAYVSDTEDLKQDPSYQDTWDDMIINFLAESLDVIQDADWVMSLGNVFAKHYELYASDDQHTALLHRCLGILLQKVNDRAYVHDKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDTVLEKLKDILDNVGQSIFQRILSLFSDSFRTEESDDIHAALALMYGYAAKYAPSTVIEARINALVGTNMLSRLLHVRHPRAKQAVITAIDLLGNAVINAAESGSPFPLKRRDQLLDYILTLMGRDDEDGFADYNELLRTQALAISACTTLVSVEPKLTVETRNHVMKATLGFFAIPNDPVDVVNPLIDNLITLLCAILLTGGEDGRSRAELLMLILRQIDQFVCSPVEYQRKRGCLAVHEMLLKFRMICVSGYCALGCHGSCTHNKQIDHTLYGSFSKLPSAFVLPSREALCLGDRVIMYLPRCADTNSEVRKTSAQILDLLFSISLSLPRPAGSSISAEEIELSYSALSSLEDVIAILRNDTSIDPSEVFNRIVSSLCILLTKDELVATLHGCSVAICDKIKQSAEGAIQAVVEFVTKRGRELTDIDISRTTQALISATVHATDKHLRVETLGAISSLAENTSPKTVFDEVLATAGRDTITKDISRLRGGWPMQDAFYAFSQHMVLSVLFLEHVISVLSQIPILKGDVDRVEDSQVESHTEDGKLQAAIFALTAFFRGGGKVGKRAVEQNYASVLSELTLQLGSCHGLTYSGQHEPLRNLLIAFQAFCECVGDLEMGKILARDGELSENERWISLIGDIAGCISIKRPKEVQNICLFFKNSLDRPQKYQREAAAAALSEFVRYSGGLGSLLEQMVEVLCRHVSDESSTVRRLCLRGLVQIPMIHILKYTTQVLGVILALLDDSDESVQLTAVSCLLMILESSPDDAVEPILLNLSKRLRNLQTSMNARMRASSFAVFGALSNYGIGALKEAFVEQVHAAVPRLVLHLHDEDFSVRLACRNTLKRVCPLMEIEGLLALLNTQTFLSDHRSDYEDLLRDIAKQFTQHLASRVDSYMASTVQVLFHTFCYNTIISHDIFSN 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02421 1507 Gene3D - 1246 1495 IPR011989 -
Cca03g02421 1507 Pfam non-SMC mitotic condensation complex subunit 1 1278 1393 IPR032682 -
Cca03g02421 1507 PANTHER MAESTRO HEAT-LIKE REPEAT FAMILY MEMBER 1 1 1488 - -
Cca03g02421 1507 SUPERFAMILY ARM repeat 774 1475 IPR016024 -
Cca03g02421 1507 Gene3D - 80 306 IPR011989 -
Cca03g02421 1507 SUPERFAMILY ARM repeat 33 930 IPR016024 -
Cca03g02421 1507 PANTHER MAESTRO-RELATED HEAT DOMAIN-CONTAINING 1 1488 IPR045206 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02421 K24816 - gmx:100800961 2791.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02421 03 45294636 45330783 Cca03g02421 03 45294636 45330783 ECH