Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02398 ATGGAGATCGACAAAGCAATTAGAGAGTGTGACGATCGAAGGCTTCAGACCAAGTACAACAACGCCACCTATGTTATCCAGAGAGCTTTGGCTTTGTATTCTATTGAGGAGGTTGCCTTCAGCTTCAATGGAGGAAAGGATTCAACGGTTTTGTTGCACCTACTCAGGGCTGGCTATTTTTTGCATAAAAGGGGGCAAAATAATGCCAATGGGGATCTAAAAGATTTTCCAATTCGAACAATATATTTTGAGAGTCCAAGTGTCTTCCCAGAAATCAACTCATTTACATATGATACAGCTGCTACCTATGGGTTGCAAATTGACACCATTTGCACAGATTTCAAGTCTGGTTTGGAGGCTTTGCTGAAGAATAACCCAATTCGAGCTATCTTCCTTGGAGTTCGAATTGGAGACCCTACTGCGGTTGGCCAAGAACAATTCTCCCCTAGTTCACCTGGGTGGCCACCTTTCATGAGAGTTAATCCCATTTTAGATTGGTCATACAGAGACGTGTGGGCCTTCCTTTTGACTTGCAAGGTGAACTATTGCAGCCTTTATGATCAAGGTTATACTTCAATTGGGAGCATATACGACACAGTCCCCAACTCATTATTATCCATTAGCAGTTCTTCCAATAAATTCAAACCGGCATATTTACTTACTGATGGAAGATTAGAGAGGGCTGGGAGGGCTAAAAGGCCATCTCCTTCTACTACTGTTGTACAACTTCCTGCTGATAGCAATGGTTTGACTAACCTGGATTCCCATAAAAACAGCATGCTCACTGCATCAATCATTGCTGTGGGAGATGAGATTCTGTTTGGCATTGTTGAGGATCAGTTGGGACCTTATTTGTGTACGAAGCTGCATTCCATTGGTTGGTCTGTGTTTCAACTTTCTGTTGTACACAACAATATAGATTCTGTGGCTGAAGAAGTTGAGCGACAGAAATCTAAAAGTGACATGGTATTTATATATGGAGGTGTAGGTCCACTGCATTCAGATGTTACCTTAGCAGGCATTGCAAAAGCTTTTGGTGTTCGTTTGGCTCCTGATGAAGAATTTGAAGAATATCTCAGGCACATTATTGGTGATCAGTGTACTGGTGATCGGAATGAGATGGCTCAATTGCCTGAGGGCATAACTGAATTATGGCATCATGACAAATTGTCTGTTCCATTGATCAAGTGCCAAAATGTAGTAATTCTAAGTGCAACAAATGTTCTGGAGCTGGAAAAGCAGTGGGACTGTTGGATTGAATTAGCAAAATCTGGTGACATACTATCATTGCTGGAACCATTTGTATCAAAGCACGTGACAACTAATCTGTCAGATGTTGAAATTGCTCAACCTCTGTCAAAGCTTTGCCTTGAATTTCCAGACATTTATGTTGGTTGTTACCGCAAAACCAGATATGGATCTCTTATAGTAAGCCTCAAAGGAAAGGACCAAGCACGGCTTGAATCAGCTATTAAAGCATTACACAAGAAGTTTCAAACTGGTGCTTTCAACGAGGTGAACTAG 1524 0.4154 MEIDKAIRECDDRRLQTKYNNATYVIQRALALYSIEEVAFSFNGGKDSTVLLHLLRAGYFLHKRGQNNANGDLKDFPIRTIYFESPSVFPEINSFTYDTAATYGLQIDTICTDFKSGLEALLKNNPIRAIFLGVRIGDPTAVGQEQFSPSSPGWPPFMRVNPILDWSYRDVWAFLLTCKVNYCSLYDQGYTSIGSIYDTVPNSLLSISSSSNKFKPAYLLTDGRLERAGRAKRPSPSTTVVQLPADSNGLTNLDSHKNSMLTASIIAVGDEILFGIVEDQLGPYLCTKLHSIGWSVFQLSVVHNNIDSVAEEVERQKSKSDMVFIYGGVGPLHSDVTLAGIAKAFGVRLAPDEEFEEYLRHIIGDQCTGDRNEMAQLPEGITELWHHDKLSVPLIKCQNVVILSATNVLELEKQWDCWIELAKSGDILSLLEPFVSKHVTTNLSDVEIAQPLSKLCLEFPDIYVGCYRKTRYGSLIVSLKGKDQARLESAIKALHKKFQTGAFNEVN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02398 507 CDD PAPS_reductase 37 194 IPR002500 GO:0003824
Cca03g02398 507 Pfam Probable molybdopterin binding domain 265 360 IPR001453 -
Cca03g02398 507 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 1 498 - -
Cca03g02398 507 Pfam Phosphoadenosine phosphosulfate reductase family 38 200 IPR002500 GO:0003824
Cca03g02398 507 Gene3D - 259 416 IPR036425 -
Cca03g02398 507 Gene3D HUPs 2 234 IPR014729 -
Cca03g02398 507 SUPERFAMILY Molybdenum cofactor biosynthesis proteins 260 386 IPR036425 -
Cca03g02398 507 PANTHER FAD SYNTHASE-LIKE 1 498 - -
Cca03g02398 507 SMART MoCF_biosynth_3a 264 425 IPR001453 -
Cca03g02398 507 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 189 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02398 - - gmx:100816619 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02398 03 45062783 45072419 Cca03g02398 03 45062783 45072419 ECH