Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02397 ATGGAAGGAAGCAATAGCAACGACCAAAACAAGGCGAAGAAAGGGTTGGAAGGCAGTGGCATCGATTTACCCATTAACCGTCGTGCCAACTTGAAAAGCGCTACCAGCGACGACGACTTCACCGACATTCTCGCTCACATCAAATCCTCTTCAACCCCCGCTGTTATCAATTACGGCGCTTCTTGGTGTCGTGTTTGTAGCCAAATTCTCCCGGCATTCTGTAAACTGAGCAATAATTTTCCGAAGCTTACGTTTGTGTACGCAGACATTGATGAATGCCCGGAAACAACTCAACACATTCGATACACCCCCACCTTCCAATTTTACCGGAATGGTGAAAAGGTAGATGAGATGTATGGGGCTGGAGAAGAGAGGCTCCATGATCGACTGTGGTTGCACTCTTAA 405 0.4741 MEGSNSNDQNKAKKGLEGSGIDLPINRRANLKSATSDDDFTDILAHIKSSSTPAVINYGASWCRVCSQILPAFCKLSNNFPKLTFVYADIDECPETTQHIRYTPTFQFYRNGEKVDEMYGAGEERLHDRLWLHS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02397 134 CDD TRX_family 38 130 - -
Cca03g02397 134 Pfam Thioredoxin 36 126 IPR013766 -
Cca03g02397 134 MobiDBLite consensus disorder prediction 1 21 - -
Cca03g02397 134 Gene3D Glutaredoxin 20 132 - -
Cca03g02397 134 SUPERFAMILY Thioredoxin-like 32 129 IPR036249 -
Cca03g02397 134 PANTHER THIOREDOXIN-LIKE 3-3 6 134 IPR044193 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02397 K03671 - gmx:100305694 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02397 03 45058516 45061045 Cca03g02397 03 45058516 45061045 ECH