Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02396 ATGCGGGAGGCTTTAGTCGGATATGGACTGAGTACCTCTAAAGCAGAGGTCGGTAGTCGTTCTAATCGGTCTGCCATATGCGGTTCTAAGGCAAGCGTGGTTGGTATAGGGCTGACCAAGCTCATGCGGGAGGCTTTAGTCGGATATGGACTGAGTACCTCTAAAGCAGAGGTCGGTAGTCGTTCTAATCGGTCTGCCATATGCGGTTCTAAGGCAAGCGTGGTTGGTATAGGGCTGACCAAGCTCATGCGGGAGGCTTTAGTCGGATATGGACTGAGTACCTCTAAAGCAGAGGTCGGTAGTCGTTCTAATCGGTCTGCCATATGCGTTTCTCATTGTCATTACCCTTATTCATCTTCCTCTTGTTTCAAAGCAGAAAGCATCCTTGATATGGAAACTTTCCTCTTCACCTCAGAATCTGTAAACGAAGGTCATCCCGACAAGCTGTGTGACCAGGTTTCAGATGCCATCTTGGATGCATGCTTGGAGCAAGACCCAGACAGCAAGGTTGCATGCGAGACTTGTTCAAAAACTAACATGGTTATGGTGTTTGGTGAGATTACAACCAAGGCGAATGTGAACTACGAGAAAATAATTCGAGACACTTGTAGAGCAATTGGGTTTGTGTCAGCGGAAGTTGGTCTTGATGCTGACAACTGCAAAGTTCTGGTCAACATTGAGCAACAGAGCCCTGATATTGCTCAAGGAGTTCACGGTCACATGACCAAAAAACCCGAGGAAATTGGTGCTGGTGACCAAGGCCACATGTTTGGCTATGCCACAGATGAAACACCTGAGCTAATGCCACTCACTCATGTGCTTGCTACCCAACTTGGTGCCAAACTCACTGAGGTGAGAAAGAACAAAACATGCCCCTGGCTGAGGCCAGATGGTAAAACCCAAGTGACAGTTGAGTACAAGAACGACAATGGAGCCATGATCCCTATCCGGGTGCACACGGTTCTCATCTCAACCCAGCATGATGAATCTGTCACAAATGAACAAATTTCTGAACAATTGAAAgagcatgccaggaatgattgccatcaatcttga 1056 0.4583 MREALVGYGLSTSKAEVGSRSNRSAICGSKASVVGIGLTKLMREALVGYGLSTSKAEVGSRSNRSAICGSKASVVGIGLTKLMREALVGYGLSTSKAEVGSRSNRSAICVSHCHYPYSSSSCFKAESILDMETFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPDSKVACETCSKTNMVMVFGEITTKANVNYEKIIRDTCRAIGFVSAEVGLDADNCKVLVNIEQQSPDIAQGVHGHMTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATQLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMIPIRVHTVLISTQHDESVTNEQISEQLKEHARNDCHQS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02396 351 Gene3D - 143 242 - -
Cca03g02396 351 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 131 344 IPR002133 GO:0004478|GO:0005524|GO:0006556
Cca03g02396 351 Pfam S-adenosylmethionine synthetase, N-terminal domain 134 231 IPR022628 GO:0004478|GO:0006556
Cca03g02396 351 Gene3D - 249 350 - -
Cca03g02396 351 Pfam S-adenosylmethionine synthetase, central domain 247 346 IPR022629 GO:0004478|GO:0006556
Cca03g02396 351 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 2 131 344 - -
Cca03g02396 351 ProSitePatterns S-adenosylmethionine synthase signature 1. 249 259 IPR022631 GO:0004478|GO:0006556
Cca03g02396 351 SUPERFAMILY S-adenosylmethionine synthetase 245 347 IPR022636 GO:0004478|GO:0006556
Cca03g02396 351 SUPERFAMILY S-adenosylmethionine synthetase 133 239 IPR022636 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02396 Cca-Chr3 45044684 45059716 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02396 K00789 - csv:101222328 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02396 03 45044684 45059716 Cca03g02396 03 45044684 45059716 ECH