Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02383 ATGCAATATTTGAAACCAGCGTTTCGAAAAGCGGCATTCTACTGCCACTCCTTAACGTTAAACCCTACCTCTGTCGTCCTCTTCCCGTTTCGGTTTCGCCTCGCACCACCCGTTTCGCGCTTCTCCTCCTCAATGGCGGTGCCTCCGTCGTCGCTGGACAAGCAATTCGACGCGTTTAGGGTTCAGCTCGAAGAATCTGGAACCTTGCGCGACCGAATTCGAAGCGTCGTTTCGGAGATTGAGTCCTCAACTAGGCTCATCTATGCAACCCTTCTTCTCGTTCACCACTCTCGTCCCACTCCTGATGTTTTAGAGAAGGCCAAGTCTCAGATTAATGTATTAAAGGAGCAGTATAAGCAACTTGCTGAAGTTGTTGGAGGATGCCCTGGGCAATACTATAGGTACCATGGTGATTGGAGGAGTGAGACACAGTCCGTAGTTTCGATGCTTGCTTTTATGCATTGGCTTGAAACAGGAAGCCTTCTCGAGCACAAAGAAGCTGAGGAAAAACTTGGGTTGAATAGTTCAGACTTTGGCCTAGATGTCGAAGACTACTTAATAGGTGTCTGTTTTATGTCTAATGAATTGCCAAGGTATGTGGTGAATCAAGTGACAGCTGGGGATTATGATTGTCCGAGGAAGGTCTTAAAGTTCTTAACAGATCTCCATGCTGCATTCCGCATGCTAAATCTTCGCAATGACTTTTTGCGAAAGAAGTTTGATGGCATGAAGTATGACCTCAGGAAGGTCGAAGAAGTTTACTATGATGTTAAGATTCGGGGTTTGACACCTAATGGTGAGTCAATTGGAGATCAAGGAATCCAAGGACAGTCTTAA 837 0.46 MQYLKPAFRKAAFYCHSLTLNPTSVVLFPFRFRLAPPVSRFSSSMAVPPSSLDKQFDAFRVQLEESGTLRDRIRSVVSEIESSTRLIYATLLLVHHSRPTPDVLEKAKSQINVLKEQYKQLAEVVGGCPGQYYRYHGDWRSETQSVVSMLAFMHWLETGSLLEHKEAEEKLGLNSSDFGLDVEDYLIGVCFMSNELPRYVVNQVTAGDYDCPRKVLKFLTDLHAAFRMLNLRNDFLRKKFDGMKYDLRKVEEVYYDVKIRGLTPNGESIGDQGIQGQS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02383 278 CDD Translin 59 261 IPR033956 GO:0003697|GO:0003723|GO:0016070
Cca03g02383 278 Pfam Translin family 70 261 IPR002848 GO:0043565
Cca03g02383 278 Coils Coil 104 124 - -
Cca03g02383 278 PANTHER TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X 46 265 IPR002848 GO:0043565
Cca03g02383 278 PANTHER TRANSLIN 46 265 IPR033956 GO:0003697|GO:0003723|GO:0016070
Cca03g02383 278 Gene3D Translin; domain 1 39 177 IPR016068 GO:0043565
Cca03g02383 278 SUPERFAMILY Translin 52 262 IPR036081 GO:0043565
Cca03g02383 278 Gene3D Translin; domain 2 178 274 IPR016069 GO:0043565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02383 - - gmx:100811968 484.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02383 03 44884613 44888322 Cca03g02383 03 44884613 44888322 ECH