Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02379 ATGGCTTCCGAAGGCGTTCTCCTCGGCATGGGCAACCCTCTTCTCGACATCTCCGCCATCGTCGACCAATCCTTCTTAGAGAAGTATGGTATCACCTTGAACAACGCGATTCTTGCGGAGGACAAGCACAAACCTATGTATGAAGAAATGGGCGAAAAATTTAACGTGGAGTACATTGCTGGAGGTGCCACTCAGAATTCAATCAAGGTTGCTCAATGGATGCTTCAAGTGCCCGGGGCAACTAGTTATATGGGCAGTATTGGAAAGGATAAGTTTGGGGAAGAGATGAAGAAGAACTCGAAGCTTGCTGGTGTAAATGTTCACTATTATGAAGATGAAACTACACCTACTGGAACTTGTGCTGTATGTGTACTTGGTGGCGAAAGGTCTCTTGTGGCTAACTTAGCAGCTGCAAACTGCTACAAGTCCGAGCATTTGAAGCGACCAGAGAATTGGGCACTAGTTGAAAAGGCCAAGTATATTTATATTGCTGGCTTTTTCCTCACTGTATCACCAGATTCTATCCAGTTAGTTGCTGAGCATGCTGCTGCAAACAACAAGACTGATAATGTCGAGGAGATAGCTCTAAAGATTTCCCAGTGGCCAAAGGCATCGGGAACGCACAAAAGGATAACAGTTATCACACAGGGTGCAGATCCTGTTTGTGTTGCTGAGGATGGTAAGGTGAAAAAGTTCCCTGTGGAACTTTTGCCTAAAGAGAAACTAGTTGACACAAATGGAGCAGGAGATGCATTTGTTGGAGGATTTCTTTCACAATTGATTCTGGAGAAGCCCATTGAAGAATGTGTGAGAGGTGGCTGTTATGCAGCAAACGTTGTCATTCAGAGGTCTGGCTGCACGTACCCAGACAAGCCTGATTTTCACTGA 888 0.4527 MASEGVLLGMGNPLLDISAIVDQSFLEKYGITLNNAILAEDKHKPMYEEMGEKFNVEYIAGGATQNSIKVAQWMLQVPGATSYMGSIGKDKFGEEMKKNSKLAGVNVHYYEDETTPTGTCAVCVLGGERSLVANLAAANCYKSEHLKRPENWALVEKAKYIYIAGFFLTVSPDSIQLVAEHAAANNKTDNVEEIALKISQWPKASGTHKRITVITQGADPVCVAEDGKVKKFPVELLPKEKLVDTNGAGDAFVGGFLSQLILEKPIEECVRGGCYAANVVIQRSGCTYPDKPDFH 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02379 295 PANTHER ADENOSINE KINASE 2-LIKE ISOFORM X1 187 294 - -
Cca03g02379 295 PANTHER ADENOSINE KINASE 2-LIKE ISOFORM X1 1 187 - -
Cca03g02379 295 Gene3D - 48 185 IPR029056 -
Cca03g02379 295 SUPERFAMILY Ribokinase-like 8 288 IPR029056 -
Cca03g02379 295 CDD adenosine_kinase 4 289 - -
Cca03g02379 295 Gene3D - 186 295 IPR029056 -
Cca03g02379 295 PRINTS Adenosine kinase signature 83 97 IPR001805 GO:0004001|GO:0006166
Cca03g02379 295 PRINTS Adenosine kinase signature 114 129 IPR001805 GO:0004001|GO:0006166
Cca03g02379 295 PRINTS Adenosine kinase signature 66 75 IPR001805 GO:0004001|GO:0006166
Cca03g02379 295 PRINTS Adenosine kinase signature 152 178 IPR001805 GO:0004001|GO:0006166
Cca03g02379 295 Pfam pfkB family carbohydrate kinase 194 289 IPR011611 -
Cca03g02379 295 Pfam pfkB family carbohydrate kinase 25 190 IPR011611 -
Cca03g02379 295 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 244 257 IPR002173 GO:0016773
Cca03g02379 295 PANTHER - 187 294 IPR001805 GO:0004001|GO:0006166
Cca03g02379 295 PANTHER - 1 187 IPR001805 GO:0004001|GO:0006166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02379 Cca-Chr3 44866021 44868955 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02379 K00856 - gmx:100810561 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02379 03 44866021 44868955 Cca02g00445 02 9343666 9347986 PCT