Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02365 ATGGCACCAAAACTTTTCCACTTCCTCCCTCTCCTCATCCTAAACCTCTTCATCCAAAAAACTTCAGCCCAAGTAGCACTAGCCCCATCAGGACCCACCAACATAACCCAAGTCCTAGAGAAAGCAGGCCAATTCACAACCTTCATCAAGCTCCTCAAAGCCACACAAGTTTCTGACCGAATCAATTCACAGCTCAACAACTCAAACCAAGGCCTAACAATCTTTGCTCCCACGGATAACGCATTCTCCAGCCTAAAAGCAGGGACACTAAACTCCATAAACTCACAAGACCAAATGCAGTTGGTGCAGTTCCACATTCTCCCCACTCTCTACACCGTAACACAGTTCCAAACCGCGAGTAACCCTTTGCACACACAAGCTGGGAACAGTGACGACGGAGAGTACCCTCTAAATGTCACCACTTCGGGGAACCAAGTGAATGTCACAACTGGGGTGGTTGACACAACAGTTTCCAACACTATCTTCAGTGATAACCAGCTTGCGGTGTATCAGGTTGATAAGGTGCTTCTTCCCATGGCAATTTTTGGGTcgtcggcgccggcatctgcgccggcggaggctccggcgccgACCAAGCCGGAGAAAAATGTCCGCGCGGCTGATTCTCCGACAGGGTCGTCGGATTCATCGGTTGATGCTTCGAGTGCGGTGAGTTTGAGTGGGGAGACAGTTAAAGGTGTTACCTTTGCCGTGGCAGTCGTTGTTTCTTGTTTGTGGATTTAG 744 0.457 MAPKLFHFLPLLILNLFIQKTSAQVALAPSGPTNITQVLEKAGQFTTFIKLLKATQVSDRINSQLNNSNQGLTIFAPTDNAFSSLKAGTLNSINSQDQMQLVQFHILPTLYTVTQFQTASNPLHTQAGNSDDGEYPLNVTTSGNQVNVTTGVVDTTVSNTIFSDNQLAVYQVDKVLLPMAIFGSSAPASAPAEAPAPTKPEKNVRAADSPTGSSDSSVDASSAVSLSGETVKGVTFAVAVVVSCLWI 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02365 247 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 242 IPR045003 -
Cca03g02365 247 Gene3D FAS1 domain 15 179 IPR036378 -
Cca03g02365 247 SUPERFAMILY FAS1 domain 32 178 IPR036378 -
Cca03g02365 247 SMART fasc_3 73 179 IPR000782 -
Cca03g02365 247 ProSiteProfiles FAS1/BIgH3 domain profile. 32 176 IPR000782 -
Cca03g02365 247 MobiDBLite consensus disorder prediction 188 220 - -
Cca03g02365 247 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 5 242 - -
Cca03g02365 247 Pfam Fasciclin domain 44 178 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02365 Cca-Chr3 44638252 44639223 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02365 - - gmx:100805219 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02365 03 44638252 44639223 Cca03g02365 03 44638252 44639223 ECH