Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02320 ATGCCAACAATGCCAACCTCACAGGAAGCTCAAGTCCAGCATCCCCTGAGGGAAAAGATGAGCTCGGTTTGCATATCGAACTGCATCAACGACGCACGTGACCCGCGTGTTCCCGTGAGGGCCACGTACGTGAACCTGTACAAGTGGCCGGAATCGGATGCTGAGTTTGTGAGGTCGGTGAGTTGCAACAGAGAAAAGGGTTCGCAAATGTACGGTCACCCGAGGGTGGTGGATAGTATCTCCTGCAGGCAGATGTACCTTAGAAGCTACACCTTCTCAAGGGAAGAAGACAACGTGCCAGACAAAGCCCACAAATGTTTTGCCATGAAGAAGAAACATGGcaacaacaacaacaaaaacaaccaacCTCAGCCTCGGAAAACCAAGTGCATGGTTTGGAGTAAGACTAAGGAGATCTCCTCTAGGATTTTCCGAAGCCTCTTGTCCTGCTCTGCTAGTCTAGACGTTGTCCACCAAAAATATTGA 486 0.4774 MPTMPTSQEAQVQHPLREKMSSVCISNCINDARDPRVPVRATYVNLYKWPESDAEFVRSVSCNREKGSQMYGHPRVVDSISCRQMYLRSYTFSREEDNVPDKAHKCFAMKKKHGNNNNKNNQPQPRKTKCMVWSKTKEISSRIFRSLLSCSASLDVVHQKY 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02320 161 PANTHER - 20 161 - -
Cca03g02320 161 MobiDBLite consensus disorder prediction 110 130 - -
Cca03g02320 161 PANTHER OS05G0120300 PROTEIN-RELATED 20 161 - -
Cca03g02320 161 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02320 Cca-Chr3 44164020 44165042 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02320 - - gmx:100527315 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02320 03 44164020 44165042 Cca03g02320 03 44164020 44165042 ECH
Cca03g02320 03 44164020 44165042 Cca02g00896 02 24520517 24521272 PCT