Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02317 ATGGCGACAACCACAAAAGAGGTTCATGTTGAGGGAGAGTACATTGCCATAGAACCAAGATCTTCCCCCAACATCAACATCTTCTCTTGTTCCATCAACAGAGAATTCGAGTTCCAAAACAAGAAAGAGTCCACCACAACCTCACCAGCAGATGAACTCTTCTACAAAGGAAAACTCCTTCCTCTCCACCTCCCTCCACGCCTCCAAATGGTTGAAAAGCTTCTCCAAAACACTGATTCAACTTTTGGCTATGCAAGATCACAGTCATCATTGGAAGACAGTAGATTCCGCCACACGATGCTTTCAGCAAATGCCACCTCACCCTCGGAATCACGCAGGGTTAGTACCTGCGAATCGCTCCCACCTGATTGGTCCTCTGAAATAGAAGGCTTGGTTAGTGACAAACATGCTTCGAAGAAACAACAATGGTCCAAGAATCTCAAACAGACCAAGCAGTTCTGGCTAGGAGAGAAGCTCAAGGCTTCCAAGGCTTACTTAAAATCCTTGTTCACCAAATCTGGTTGCTCCAGCGATGCAAGCAAAGTGGTGGCGGTGAAGAAACCCAAATGCAAGGAGTGCCATGACAAGTACACGAAGGATGATGATGATGCTACCAaaaaccaaaaccaaaaccaaaacaaaaccaaaaAGAAAATAAAAAATGAGTCTTTTGGTGACAAGCAGCACCGGAGGCAGAGATCCTGTGCGGTGAAGAGCAGTGACGTCTTTGAAAATGGGTCCGTTAGCTTTAGCAGAAGGTCTTTCTCTGGGGTGATTCAACGACATTATGCTTCAAAGGCTTCATCTTTGTCCACTTCTTCTTCTGGGTCGTCTTCTTTGTCTTCATCTTTTTCACTTAGCTCAGTTGGGTCTTATGAGTTGCATTTGTTCAACAAGAGTATCAGTGCTGAGCTGGAGAATTCAATTGAGAGTGCCATTGCTTATTGTAAAAAGTCCCAGCAAGAGGGTAGTTCAAATTCAAACAAGGTTTGTGGAAATAAGGGAATAATAATGGGGAGTGAGAGAGTGGTGACTGAAAAGAATGAGTCTCTTATTTGA 1059 0.4306 MATTTKEVHVEGEYIAIEPRSSPNINIFSCSINREFEFQNKKESTTTSPADELFYKGKLLPLHLPPRLQMVEKLLQNTDSTFGYARSQSSLEDSRFRHTMLSANATSPSESRRVSTCESLPPDWSSEIEGLVSDKHASKKQQWSKNLKQTKQFWLGEKLKASKAYLKSLFTKSGCSSDASKVVAVKKPKCKECHDKYTKDDDDATKNQNQNQNKTKKKIKNESFGDKQHRRQRSCAVKSSDVFENGSVSFSRRSFSGVIQRHYASKASSLSTSSSGSSSLSSSFSLSSVGSYELHLFNKSISAELENSIESAIAYCKKSQQEGSSNSNKVCGNKGIIMGSERVVTEKNESLI 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02317 352 MobiDBLite consensus disorder prediction 196 238 - -
Cca03g02317 352 MobiDBLite consensus disorder prediction 215 237 - -
Cca03g02317 352 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 3-RELATED 1 333 - -
Cca03g02317 352 PANTHER MEMBRANE-ASSOCIATED KINASE REGULATOR 4-RELATED 1 333 IPR039620 GO:0005886|GO:0019210
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02317 Cca-Chr3 44133376 44134434 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02317 - - gmx:100780248 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02317 03 44133376 44134434 Cca03g02317 03 44133376 44134434 ECH
Cca03g02317 03 44133376 44134434 Cca02g00903 02 24640925 24642343 PCT