Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02311 ATGAAAGGCATAGACATCTTGTGTGCATCACAGGCATCAACAGCCATATGTCTTAGCATGGATCAACCCTCTTCCTCTTCTTGTACTTCTTCCAACACCACTCAATTTGGTGGAAGAGCTATTGACCGCCACAACCCCATCATCACAGATCCTAGAAGAACCCCCTCAAGAGATTTCATTGACCCTAGCTCTTCTTCTCACCCTCCCATTGACCCCAAGCCTTTGCATGATCTTCTTCCAAAGGCCAAGAAAAACTCCACTCCCAAGCCAAGTGGCCAGAAGAAGAAAAATGCAACAAAGGGTCATGATCAGAAGAAGAAAAGTGCTAAGGGAAAGTTGACTGAACAGATAACCAACAATTACTCTTCAAAACCAATTGACAGTGTTCTGCGGAGGAGTTGGGTTAGGCCACCTTCTGATTTAATCACTCCTCCTGGTTCAACAAGATATTTGCTCGGTGACACGCCTTCCTTTGATGCTGCATCAGGTTGTGATCCTGTGATGGCTTTAGCCAAGGTTGATAAGGACAAAGCTCAAGTCCTTCATCAAGATGAAAACAATCATTCATCTAAACGTTCTAGCTCCTCTCTTCCAAAAACTGGTTCTTCCGACCAGATTGTAGTATTGAGGGTTTCTCTGCACTGCAAAGGTTGTGAAGGGAAGGTCAGGAAACATCTCTCTAGAATGCGAGGAGTTAAGTCCTTCAACATAGACTTTGTGGCAAAGAAGGTTACAGTAGTTGGTGACGTGACTCCTTTGAGCGTATTGGCAAGCATATCAAAGGTGAAGAATGCACAATTTTGGCCAGAACCTGCTTCAGTAATTGGATCTGGTATTGCATGA 843 0.4425 MKGIDILCASQASTAICLSMDQPSSSSCTSSNTTQFGGRAIDRHNPIITDPRRTPSRDFIDPSSSSHPPIDPKPLHDLLPKAKKNSTPKPSGQKKKNATKGHDQKKKSAKGKLTEQITNNYSSKPIDSVLRRSWVRPPSDLITPPGSTRYLLGDTPSFDAASGCDPVMALAKVDKDKAQVLHQDENNHSSKRSSSSLPKTGSSDQIVVLRVSLHCKGCEGKVRKHLSRMRGVKSFNIDFVAKKVTVVGDVTPLSVLASISKVKNAQFWPEPASVIGSGIA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02311 280 ProSiteProfiles Heavy-metal-associated domain profile. 205 262 IPR006121 GO:0046872
Cca03g02311 280 Gene3D - 203 266 - -
Cca03g02311 280 MobiDBLite consensus disorder prediction 181 203 - -
Cca03g02311 280 PANTHER COPPER CHAPERONE 1 277 - -
Cca03g02311 280 Pfam Heavy-metal-associated domain 209 261 IPR006121 GO:0046872
Cca03g02311 280 PANTHER OS08G0405700 PROTEIN 1 277 IPR044526 -
Cca03g02311 280 MobiDBLite consensus disorder prediction 20 39 - -
Cca03g02311 280 CDD HMA 208 261 IPR006121 GO:0046872
Cca03g02311 280 MobiDBLite consensus disorder prediction 20 120 - -
Cca03g02311 280 SUPERFAMILY HMA, heavy metal-associated domain 205 262 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02311 Cca-Chr3 44075580 44077881 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02311 - - gmx:100810015 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02311 03 44075580 44077881 Cca02g00908 02 24786435 24788063 PCT