Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02292 ATGACGTCTGACGAAAGCAAATTTAAAAATATTTATAGCCATCCATCCAGCAATCGGGAGATACAATTTCAATCAATGGCGCTCGCAGTTCCCGGCGACGAAGAAACGCCACTCGTCGGCGGCGACACACTCGAATCGCCCAAGAGCCACCACACGAGGGATATTCACATCTTGAGCTTCGCCTTTCTCTTAGTTTTTCTCTCCTTCGGTGCTGCTCAGAATTTGCAGAGCACTTTAAACACTGAGGATGACTTGGGTACCACATCGCTTGGGATCCTCTATTTGTCTTTCACATTCTTCTCCGTGGTTGCTTCCTTGGTGGTGAGAGTTCTCGGCGCCAAAAACGCTTTGCTTATTGGGACAACTGGCTATGTGCTTTATGTGGCTGCCAACTTGAAGCCTACTTGGTATACATTGGTTCCTGCTTCTGTGTATCTTGGGTTTTGTGCTTCCATAATATGGGTTGGAGAGGGAACATATCTCACTTCTGCTGCACGCAGCCATGCTACAGATAACAACTTGCATGAAGGTGCAGTAATTGGTGACTTCAATGGGGAATTCTGGGCTGTGTATGCACTCCACCAGTTTATTGGAAATCTTATTACATTTTTTGTACTGAGCGATGATGAGCAGGAGGGAATGTCCAAAGGCTCAACATTATTGTTTGCTGTATTCCTTATCATTATGACCTTTGGTGCAATACTAATGTGCTTCTTGCGCAAACGGCGTGCTAATAGTAAGGGACAGCATGAGCTTTCAGGTGCAGATGCTGGTGCGTGTGCGTCCTTGAAGTCTCTATCTAAATCACTTGCAAATGCATTGTCTGATGTTAAGATGTTGCTGGTCATACCCCTTATTGCATATTCTGGTCTACAGCAAGCATTTGTGTGGGCTGAATTTACCAAGTACGTTGTGAAACCTGCAATTGGTATTTCCGGTGTGGGTAGCTCAATGGCAGCTTATGGGGCTTTTGATGGAATATGTTCCTTGCTTGctggtcgtctcacctctggtctctcgtctattacgtctatagtttctGTTGGAGTTTTTGCTCACGCAGTCGTATTAATCTTACTTCTGCTAGATTTCAGCATAACTAGCGGATGGCTTGGTACTCTTTACATACTCTTTTTGGCTGGTTTATTGGGCATCGGTGATGGAGTTTTCATGACGCAACTTAATGCATTGATTGGAATACTATTTAAGCACGACACGGAAGGGGCTTTTGCGCAGCTAAAGATATGGCAATGCGCTATAATCGCAATGGTGTTCTTTTTCGCCCCGTTGATCTCCTTCAAAGCTGTGGTTGTGATTATGCTTGCGTTCCTTTGCTTCTCATTCAGCATTTTTCTATGGCTTGCTCTGAAGGTGGGGAAGTCATCATCATCACCGTCCAACAGTCAGTGA 1410 0.434 MTSDESKFKNIYSHPSSNREIQFQSMALAVPGDEETPLVGGDTLESPKSHHTRDIHILSFAFLLVFLSFGAAQNLQSTLNTEDDLGTTSLGILYLSFTFFSVVASLVVRVLGAKNALLIGTTGYVLYVAANLKPTWYTLVPASVYLGFCASIIWVGEGTYLTSAARSHATDNNLHEGAVIGDFNGEFWAVYALHQFIGNLITFFVLSDDEQEGMSKGSTLLFAVFLIIMTFGAILMCFLRKRRANSKGQHELSGADAGACASLKSLSKSLANALSDVKMLLVIPLIAYSGLQQAFVWAEFTKYVVKPAIGISGVGSSMAAYGAFDGICSLLAGRLTSGLSSITSIVSVGVFAHAVVLILLLLDFSITSGWLGTLYILFLAGLLGIGDGVFMTQLNALIGILFKHDTEGAFAQLKIWQCAIIAMVFFFAPLISFKAVVVIMLAFLCFSFSIFLWLALKVGKSSSSPSNSQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02292 469 Pfam Ion channel regulatory protein UNC-93 85 452 IPR010291 -
Cca03g02292 469 PANTHER - 48 463 IPR044771 GO:0055075
Cca03g02292 469 SUPERFAMILY MFS general substrate transporter 46 455 IPR036259 -
Cca03g02292 469 CDD MFS_unc93_like 55 457 IPR044771 GO:0055075
Cca03g02292 469 PANTHER UNC-93 RELATED 48 463 - -
Cca03g02292 469 Gene3D MFS general substrate transporter like domains 50 254 IPR036259 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02292 - - gmx:100782063 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02292 03 43867766 43872272 Cca03g02292 03 43867766 43872272 ECH