Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02287 ATGCCAACAACATCCTCCTCAATCGCCGCCACCAGAGCGGAGGAGTGGCGAACTCGAATAGGCTCCGCCCTACGAACCACCGTGGCATGCACCGTAGTAGGCCTCACCTCCCTCTACGGCCCGGCGCCTCTCCGCCGCTACCTGGAGTTCCCATCCTTCACCTACGCCACAACGCTCCTCATAGTGTCCGACGCAACGCTCGCCCAAACCCTAAGGGGATGCTGGCGCGTGCTGTGTTCCAACGTCCAGGTCATGATCCTGTCCCTGCTGAGCCTGCACCTGATAGGGCCGAGCAACTTCACGAACGCGGTGGCGGCGCTGGCCATGGCGGCCTCGGTGTTCGTGGTTGCGCTCCCGGAGCGGAGCCACTTGGTGACTAAGCAGCTTGCGTTTGGACAGCTGGTGAATGTGTTCGTTAGCACCGCCGTGGATGGCGGAAAAACAGGCGTGGCCGTGCACGCGATTCACGTGGTGTGCTCCACCGCCTTTGGAGCTCTCGCTTCTCTCGCTTCTTTTGTCGCCACGCCCTTTCCCTATCCTCGACTTGCCTACTATCAGACAAAGAAGTTATACCGATTATACGCTGAGAATACTTGTGAGAGGTTCAATTGCATCATAGAGGCCATCTCTGCCTCAGACAACTCAACTGCTACAGGTTTCTTCACTCAAGCAAAGTCCCTTTCCACAACAGGAGCCAAGCTTCTCCAAAGTATTAGAACCAAACTGGATGGCATGCATTGGGAACGGCCACAAACAAAAATTTTCAACCCCCATTGGATTGACCCAGAAGAAAAACTGCAAGACTTGGAGCTACCAATAAGAGCTATGGGCATTGCTTTATCAACTTTTACTTCTTTTCCTGTTGGGGTCATTGATGAGGAGCTCAGAGGTGTCTTGCTGAATTGCAGAGGACAATTCAGCAAAAAATTAGGTCAGCAAGCCAAGTGCTTTGCACCTTTTGATACAACCATAAATTCAGAGATAAAAAAAGACATTTTGACCAAAAACCTGTCGGTAGCCTATAAAGATCTACCAACCTCGTTCTTTTTATACTGTGTCCATCTTCTCCTAGATGACTCACCCATTGCAAAGAAAAATGACCATTTGCTGGGGAAAACTCAGAAAAGTGGTGATCCGAATTGGAGCACCAGAGAGGTTGTGATGAACTTGATTCCCAGCAACCACAACTTGGCTTTTGCATTCAAGTCCTCTCTTTCGCTAGGCCTCGCTGTGTTTTTCGGTTTGACATATAACAAGGAAAATGGATACTGGGCGGGACTCTTAATCTCCCTATGTTTCGTGACTGGACGCCATCCAACATTCTCACTAGCAAATGCACGAGGGCAAGGAACAGCAATGGGATCGATCTACGGGATCCTTTGTTGTTTCATTTTCCAAAAAAATTTGCGTTTCAGTTTCTTAGCTCTTTTACCATGGGTCTTTTTTTCTTCTTTTCTCAAGTATAGTAGAATGTATGGTCAAGCTGGTGGGATTTCAGCAGCTACAGGGGCCTTATTGGTCATTGGTATGAAGCACAATGAACCTCCAATTCAATTTGCACTTGCTAGAATGGTCGAGGCCACAATTGGACTCCTTTGCTTCGTTATTGTAGAGATTGTTTTTAATCCTTGCAGAGCTGCAACTCTTGCAAAATTTGAACTTTCTCAATGCTTGAAATCACTTCAAGATTGCATTGAGCAGATTGACATTAGTACTCCAACCAAGAAAGAGATGTCATTTTCAAGCTGTCCAGCATTGAGAGAATGCCAGAAAAAGCTGAAATCTCTAGCGGATCAATTAGAAGAGTTCACAGCAGAGGCTGAATTGGAACCAAATTTCTTGTTCGTTCCATTCCATAATGAATGCTACAAAAAGATGCTGGAATCACTATCAAAGATGGCAGATCTCTTAATTTTTGTGGCATACTCAATGGAAAATGTCATGCTACTGTCACAGAAAAATGGAGCATTTTGGAAGGATCTCCATGATCAAGTAAATGAGAATGTGAGGACTTTTAATAACAAAATTAGCCCCACATTGAAATGCCTTGAAGAGATAACAAGGATAAAATCTCCTAGGAAGCTTGAAAATGACAACCTTCCTTGTGATGTTGAGACACAAGAATATCCAAATACAAATGCATTTGGGGACTGGAGTGGAGAAGAAGAGGTCAATAGCATTACAAGCTCTTTTATCAAACATCTGGAGGAGATGGCTACCAAAACTCACACCAACATAGATGAGGAGATGCTTAAAGGTCAAATGGTTTTCCATTACAGTTGCTTAGGTTTCTGTACTAGTAACTTGATGAGAGAAACAATGAAGATTCAGAGTGAAGTAAAAGAACTACTTAAGTGGGAGAATTCAAGTCAAACAAACTTCGACAAATTTTTTTGTTAA 2400 0.4504 MPTTSSSIAATRAEEWRTRIGSALRTTVACTVVGLTSLYGPAPLRRYLEFPSFTYATTLLIVSDATLAQTLRGCWRVLCSNVQVMILSLLSLHLIGPSNFTNAVAALAMAASVFVVALPERSHLVTKQLAFGQLVNVFVSTAVDGGKTGVAVHAIHVVCSTAFGALASLASFVATPFPYPRLAYYQTKKLYRLYAENTCERFNCIIEAISASDNSTATGFFTQAKSLSTTGAKLLQSIRTKLDGMHWERPQTKIFNPHWIDPEEKLQDLELPIRAMGIALSTFTSFPVGVIDEELRGVLLNCRGQFSKKLGQQAKCFAPFDTTINSEIKKDILTKNLSVAYKDLPTSFFLYCVHLLLDDSPIAKKNDHLLGKTQKSGDPNWSTREVVMNLIPSNHNLAFAFKSSLSLGLAVFFGLTYNKENGYWAGLLISLCFVTGRHPTFSLANARGQGTAMGSIYGILCCFIFQKNLRFSFLALLPWVFFSSFLKYSRMYGQAGGISAATGALLVIGMKHNEPPIQFALARMVEATIGLLCFVIVEIVFNPCRAATLAKFELSQCLKSLQDCIEQIDISTPTKKEMSFSSCPALRECQKKLKSLADQLEEFTAEAELEPNFLFVPFHNECYKKMLESLSKMADLLIFVAYSMENVMLLSQKNGAFWKDLHDQVNENVRTFNNKISPTLKCLEEITRIKSPRKLENDNLPCDVETQEYPNTNAFGDWSGEEEVNSITSSFIKHLEEMATKTHTNIDEEMLKGQMVFHYSCLGFCTSNLMRETMKIQSEVKELLKWENSSQTNFDKFFC 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02287 799 PANTHER F3L24.34 PROTEIN 13 791 - -
Cca03g02287 799 Coils Coil 586 606 - -
Cca03g02287 799 Pfam Fusaric acid resistance protein-like 409 537 - -
Cca03g02287 799 PANTHER P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED 13 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca03g02287 Cca-Chr3 43813635 43820033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02287 - - aprc:113863134 1147.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02287 03 43813635 43820033 Cca03g02287 03 43813635 43820033 ECH