Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02277 ATGGTATGGTTGGCAATGGCGGAAGCTCCTTCTCTGGTTTCTGTGTGCATGGACGCTCTCTCGCACCAACTTCTCCATGAATGCGACGATCTTCTTCTCTCCTCCATTTACCACCTTCCTTCTCACTTACTCGACACCTTAATCACGCGTTTGCCCCCTCTCGCGCTTCGCACATTCCACCTCCACCTGCCATTCGACCACCACTCCACCAAAAAGAGGAAACGCGCAAGGTTCAGCTTCCGCACCCTTTCACCTTTAATTTCCTTCTGCTTACGGACACTCTCGTTTCGTTCTTGTTTCAGGGAATGGAATCTCAATTCGGCTTGGCAGAGTTTGTTTCAGCAACGCTGGCCTCACCGCCTTCACCGGATTCACCCAACCGATTGGCAGCAGCTCTATTGGGAAACTCATTTGCAAGATTGTCTAGATCAAGCAGCGGAGGTGGCTCTAATCCCATCGTTTGTTGGATATATCGGTGACATACGCATTTCCGACAGCATATTGAAATCTATTGGCTTTGTGGGGAATTCAAGCCACTCGACTTGTGACCAGTCAAAATTATCTTACCATTGCCTACAATTTGGCAGCCAATTGAGTTGTCTGAGGCTGCAAAATGTTCTATGTAATGAAGAAACTAGTGTTTTGTTGAGGGAATGCAAGCTGCAGAGTCTGGTACTAAGATGTATCAGATCCAGGGGACAAATTGATGGATTATGCAAACTTATTGCTCAACATCGTAGTACCTTAACATCTCTGGAATTTGTTCACTGTACACTCTCCCTAGATTTTATTAATGCAATATTTGGTTCGCTAATCATAGAAAGTGTACAAAAACATGGGATCCAACATTTGTCAATCATCGCCTCAAGTTTTCTGGAACCATGCACAGTTTCTTTACCTAGTGGACTTGTCTCTTTTTTGTCTTTGGGAAGGTCCTTGTGCTCATTAAAATTATCTGACAACCACCATGGACGGACTTTTGCCAAAGATCTTTTTGTAACTCTTCTCAATGTTTCCTCTGGCATATCTGTCCTTGACCTTTCTGGGAATAAAATAGCAGGATGGCTTTCTGATTTTAACAGGAAATTCTTGAGTGGTTCACATCTGTCTTTTGGAAATGGAAAGTCCTTGAAACTGTTGCGTGTACTCAATCTGAGGGAAAACAATTTAGGAAAAGATGACATAGAAAGTCTTAGATATGCTCTTGAACATGCGCCTAACTTGGAGGAGCTGGACATAAGTGACAATTCTATTGAATTTGAAGGAATCAGGAATTTAATTCCCTATTTTGTTGGAGCATCTGAAATGTCTCCCGGCATAACTTGCTTGAAATTAGAGAATTGTGATCTGTCCTATGTTGGAATGAATCATCTCCTTCATGTCCTTTCTACTTACAAAGGACCATTGAAGTCTCTTTCTATTGCTGACAACTACCTTGGCAGTCAAGTAGCTAGCGCATTGGGGAAACTTTTGAGCTCCCCAATCGAAGTACTTGACATTTCAGGCATTGGCTTGGGTTCTTGTGGTTTTCAAGAGCTTCAAAATCTAATAAAAGAGGAGCTTAAGCTGGTGAAGATTAATATAAGCAAAAATCGTGGTGGCATTGAAACTGCCAAATTTTTGTTCAAACTCTTGTCACGGGCTCCACAACTTGTTGATGTGAATGCAGCCAGTAATCTTATGCCAATAGAAGATTCACTGACCATCATCTGCTCTGCATTAAAGTTTGCAAAAGGTAATGTTCAATGTATAGACTTGACGGGACATATATGGGACTATAAGCCAGAGGATGTTTCTTCATTCACTGAATTTGTATATAATGGATTACCTATAGTGGTTCTTCCGCCGTCATCAACCTCTGCTGCACCTCAGGACCATGATCCTTAG 1887 0.4229 MVWLAMAEAPSLVSVCMDALSHQLLHECDDLLLSSIYHLPSHLLDTLITRLPPLALRTFHLHLPFDHHSTKKRKRARFSFRTLSPLISFCLRTLSFRSCFREWNLNSAWQSLFQQRWPHRLHRIHPTDWQQLYWETHLQDCLDQAAEVALIPSFVGYIGDIRISDSILKSIGFVGNSSHSTCDQSKLSYHCLQFGSQLSCLRLQNVLCNEETSVLLRECKLQSLVLRCIRSRGQIDGLCKLIAQHRSTLTSLEFVHCTLSLDFINAIFGSLIIESVQKHGIQHLSIIASSFLEPCTVSLPSGLVSFLSLGRSLCSLKLSDNHHGRTFAKDLFVTLLNVSSGISVLDLSGNKIAGWLSDFNRKFLSGSHLSFGNGKSLKLLRVLNLRENNLGKDDIESLRYALEHAPNLEELDISDNSIEFEGIRNLIPYFVGASEMSPGITCLKLENCDLSYVGMNHLLHVLSTYKGPLKSLSIADNYLGSQVASALGKLLSSPIEVLDISGIGLGSCGFQELQNLIKEELKLVKINISKNRGGIETAKFLFKLLSRAPQLVDVNAASNLMPIEDSLTIICSALKFAKGNVQCIDLTGHIWDYKPEDVSSFTEFVYNGLPIVVLPPSSTSAAPQDHDP 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02277 628 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 6 628 - -
Cca03g02277 628 Gene3D Ribonuclease Inhibitor 360 597 IPR032675 -
Cca03g02277 628 Gene3D Ribonuclease Inhibitor 157 359 IPR032675 -
Cca03g02277 628 SUPERFAMILY RNI-like 200 592 - -
Cca03g02277 628 SMART LRR_RI_2 492 519 - -
Cca03g02277 628 SMART LRR_RI_2 437 464 - -
Cca03g02277 628 SMART LRR_RI_2 405 432 - -
Cca03g02277 628 SMART LRR_RI_2 377 404 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02277 - - gmx:100817679 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02277 03 43701128 43708299 Cca03g02277 03 43701128 43708299 ECH