Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca03g02250 ATGAACTGTAAAATGGTGCTTGATTGTGATGACCATCTTTTATACTGTTGCAGTTCCACGAAGAAAGTGGATGAAGAGACAGGCAAATACTATGGTAGGAAGGCTGTGTCATTTGTTTTAATTACTATTACTGGTGGTGTTGCTCTAAGTGCCCTTGATGACCTTGCCATCTATCATGGATGTAGCAGCAAGGCCATGGAAAAGGTCAGCAAGAATCAGGCAGTAATAGATGCTATTGGAGAACCAATTGTTAAAGGTCCATGGTATAATGCATCTCTTGCAGTAGCTCATAAAAGACATTCTCTTTCATGTTCATTTCCTGTTTCTGGACCACAGGGCACTGGTGTCTTGCAGTTGAAGGCTGTTCGAAATGGAGAGGACACTTGGTCTTCCTTCTTCCTTTCTCGCGATTGGGACATTTTAATCATGGATGCTCTCCTCCATGTACCTGAGAACGAGGAGAGGAACCGAACATTGCGGATCAATCTCATTGACAGGCCTTTTTCATGTACTTCTTGCCCTGGGTCCACTCCTCATCCATCAGAAAATTCAAAGGCAAAATTGAGTTCTAATCAATAA 579 0.4249 MNCKMVLDCDDHLLYCCSSTKKVDEETGKYYGRKAVSFVLITITGGVALSALDDLAIYHGCSSKAMEKVSKNQAVIDAIGEPIVKGPWYNASLAVAHKRHSLSCSFPVSGPQGTGVLQLKAVRNGEDTWSSFFLSRDWDILIMDALLHVPENEERNRTLRINLIDRPFSCTSCPGSTPHPSENSKAKLSSNQ 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca03g02250 192 MobiDBLite consensus disorder prediction 172 192 - -
Cca03g02250 192 PANTHER CYTOCHROME OXIDASE COMPLEX ASSEMBLY PROTEIN 17 185 - -
Cca03g02250 192 Pfam Cytochrome oxidase complex assembly protein 1 62 129 IPR014807 -
Cca03g02250 192 PANTHER CYTOCHROME OXIDASE COMPLEX ASSEMBLY PROTEIN 17 185 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca03g02250 - - gmx:100813252 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02250 03 43350196 43353237 Cca03g02250 03 43350196 43353237 ECH